Gene BBta_5509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5509 
SymbolflgF 
ID5152614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5727020 
End bp5727784 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID640560254 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001241376 
Protein GI148256791 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0521919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAATG CGCTTCTCAT CGGATTGTCG CGGCAGATGG TGCTGGAGCG ACAACTCGAC 
GTCGTTGCCA ACAACGTCGC CAACGTGAAC ACCAACGGCT TCAAGGCCGA TCAGCAGCTC
TTCGAGGAGT ATCTCTCCTC CAAGGCTCAC GAGGACAATT TTCCGGGCGC GAGCCGCAAG
GTGTCCTATG TCCAGGACCG CGGCACCTAT CGCGACTTTT CGCAGGGCTC GGCCCAGCAC
ACCGGCAACG CGCTCGACGT CGCCATTTCG GGCAACGGCT TCCTGACGGT GCAGACCGCC
GCCGGCGAGC GCTACACCCG CGACGGCAAT CTGCACATGA ACAATCTCGG CCAGCTCGTC
ACCGCCGCGG GCGATCTCGT GCTCGGCACC GGCGGCCCGA TCGTGCTGCA GCCGACCGAC
CACGACATCA ACATTTCCCC CGACGGCACC GTCACGGTGG TCGAGGGCGT CAACCGCACC
GATTCGATCC GCGGCAAGCT GAAGCTCGTC AGCTTCGCCG ACCCGCAACA GGCGCAGAAG
CAAGGCAACA ACCTTTATTC CGCCGCCGGC GGCGTGACGC CGCAGCCGGA TACGAAGTCG
ACCGTCCAGC AGGGCTACAT CGAAAAGTCG AACGTGAGCG CGGTCGGCGA GATGAGCAGG
ATGGTCGAAG TGATGCGCAG CTACACCCAG GTCGCCAACA TGCTGCAGGT CCAGAGCGAC
ATGCGCAAGA ATGCGATCGA GAAACTCGCC GACGTTCCGG CCTGA
 
Protein sequence
MENALLIGLS RQMVLERQLD VVANNVANVN TNGFKADQQL FEEYLSSKAH EDNFPGASRK 
VSYVQDRGTY RDFSQGSAQH TGNALDVAIS GNGFLTVQTA AGERYTRDGN LHMNNLGQLV
TAAGDLVLGT GGPIVLQPTD HDINISPDGT VTVVEGVNRT DSIRGKLKLV SFADPQQAQK
QGNNLYSAAG GVTPQPDTKS TVQQGYIEKS NVSAVGEMSR MVEVMRSYTQ VANMLQVQSD
MRKNAIEKLA DVPA