Gene BBta_5492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5492 
SymbolflhB 
ID5151644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5710038 
End bp5711117 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID640560238 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001241360 
Protein GI148256775 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG AGGACGATTC CGAGGACAAA ACAGAAGACC CGACGCAAAA ACGCCTCGAC 
CAGGCGCTCG AGCGCGGCGA TGTCGTCAAG AGCCAGGAGC TGAACACCTG GTTCGTGATC
GCCGCCGCGA CCTTGGTGAT GTCGACCTTC TCCGGCTCGA TCGGCACCGC GGTGCTGGTG
CCGATGCGCA ACCTCATCGC CAATTCATGG ATGATCCATA CCGACGGTGC GGGCCTGCTG
GCGCTGGCGC GCAGCCTGTC CTTCGCGGTG ATCGCGGCCA TCGGCGTGCC GATCCTGATG
GTGATGCTGG CGGCGATCGC AGGCAACATG ATGCAGCATC GCCTGGTCTG GTCCGGCGAG
CCGCTGAAGC CGAACTTCGG CAAGATCTCG CCGCTGGCCG GGGCCAAGCG GCTGTTCGGC
AAGCAGGCCG CGGCCAATTT CGCCAAGGGC ATCTTCAAGC TCGTCCTGCT CGGCACGGTC
ATGGTCATGA TCCTGTGGCC GGAGCGGCTG CGCCTCGAAT CGCTGCTGCA TATGGACGTC
AGCGAATTGC TCGGCGTCAC GATCTCGCTG ACCAAGCATC TGATGGGCTC GGTGGTCGCG
CTGCTCGCGC TGGTCGCGAT CGGCGACTAC CTGTTCCAGT ACCGGCAATG GTACGAGCGC
CAGAAGATGT CGGTGCAGGA GATGAAGGAG GAGTTCAAGC AGTCGGAAGG CGATCCGCAC
GTCAAGGGGC GCATCCGCCA GATTCGCCAG CAGCGCATGA AGAAGCGCAT GATGGCGGCG
GTTCCCAAGG CCTCCGTGAT CATCACCAAC CCGACCCACT ATTCAGTCGC ACTGGCCTAT
GAGCGCGGCA TGTCGGCGCC GGTCTGCGTC GCCAAGGGCG TCGACAATAT CGCCTTCAAG
ATCCGGGAGA TCGCCAAGGC GCACGACATC CCGATCGTCG AGAATGTTCC GCTGGCGCGC
GCGCTGTATG CCACCGTTGA GATCGATGCC GAGATCCCGG TGGAACATTA TCACGCGGTC
GCGGAGATCA TCAGCTATGT GATGGGACTG CGGCGCACGC TCTCGGGGCA TCCGCGATGA
 
Protein sequence
MADEDDSEDK TEDPTQKRLD QALERGDVVK SQELNTWFVI AAATLVMSTF SGSIGTAVLV 
PMRNLIANSW MIHTDGAGLL ALARSLSFAV IAAIGVPILM VMLAAIAGNM MQHRLVWSGE
PLKPNFGKIS PLAGAKRLFG KQAAANFAKG IFKLVLLGTV MVMILWPERL RLESLLHMDV
SELLGVTISL TKHLMGSVVA LLALVAIGDY LFQYRQWYER QKMSVQEMKE EFKQSEGDPH
VKGRIRQIRQ QRMKKRMMAA VPKASVIITN PTHYSVALAY ERGMSAPVCV AKGVDNIAFK
IREIAKAHDI PIVENVPLAR ALYATVEIDA EIPVEHYHAV AEIISYVMGL RRTLSGHPR