Gene BBta_5460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5460 
Symbol 
ID5150847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5680777 
End bp5681217 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID640560209 
Productputative thioesterase superfamily protein 
Protein accessionYP_001241331 
Protein GI148256746 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.303228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACTG ACGCCCTGAA CTTCACCCTC GATGACGCGC GCCGAATCCT GGACGACGTG 
TTCGCGCCCT GGATCAAGGA TCTTGCCTTG ACCGTGGAGG ACATTGCGCC GACGCCGCAG
GGCGAGCCCG GCGCCATTCT GCGCATGCCG TTCTCGTCAC GTCTGTGCCG GGACAATGGC
GTCGTCTGCG GACAGGCGAT GATGGCCTTC GCCGACACTG CGATGGTGAT CGCCATGGTC
ACGGCGAATA GCGGCTACCG GCCGATGACC ACGGTCGACC AGACCACGCA TTTCATGCGC
GCGGTCGCCT CCTCCGATGT GCTCGCCGAT GCGCGCGTTG TCCGACTCGG CCGCACCATG
AGCTTCGGCC GTGTCACGCT GACGAGCGCC ACTGACGGCA AGCCCGTCGC GATGGTGTCG
AGCGCATTCG CGATGCTCTG A
 
Protein sequence
MPTDALNFTL DDARRILDDV FAPWIKDLAL TVEDIAPTPQ GEPGAILRMP FSSRLCRDNG 
VVCGQAMMAF ADTAMVIAMV TANSGYRPMT TVDQTTHFMR AVASSDVLAD ARVVRLGRTM
SFGRVTLTSA TDGKPVAMVS SAFAML