Gene BBta_5421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5421 
Symbol 
ID5149451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5639089 
End bp5640201 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID640560175 
Producthypothetical protein 
Protein accessionYP_001241299 
Protein GI148256714 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.29406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CACATTCCAT ATTGCAGGAT CTTGAGGATG CGATCGCGCG GGGGACGGCT 
GACAGCCGCG AGCGCGCGCT GTGGCACGCG ACCGATCTTT TGATCGCGGG ACGTTATTGC
GAAGAGGAGA TCGCCACGTT CGGCGAGGTG ATCGGCCGGC TCGCCGACGA GATCGAGACG
GAAGCGCGCG CCAAGCTGGC GCATCGGTTG GCGAGGATCG AATATTCGCC GGCCAGCGTC
GTTCGCAAGC TCGCTTTCGA CGACGCGATC GAGGTCGCCG GCCCGGTGCT GCGCGAATCC
GAACGGCTCG ACGATGTCGC GCTGCTGGAG AACGCCCGCA CCAAGAGCCA GGCGCATCTG
CTCGCGATCG CCGAGCGTAA GAGCCTGAGC CCTGCCGTGA CCGACGTGCT GGCCTCGCGC
GGCAACAGCG CCGTCGCCAA TGCGGTTGCG CGCAATCAGG GCGCGCAATT CTCCGGCTCG
GGCTTCCTGC ACATGGTGCA GCGTGCCGAG AACGACTCCA TCCTGGCCGA GCATCTCGGC
CGGCGTCTCG ACATCCCGCG CCATCTGTTC CAGCAATTGA TCGCCAAGGC CTCCGACGAC
GTCGGCAAAC GGCTGGCGGA GGAACGGCCG GAGCTCGTCG GCGAGATCCA CAGCTCGGTC
GCCAATATCG CCGGCGATCT GCAATCCAAG TTCGGCCCGG GCTCGCGCAA CTACTTTGTC
GCCAAGCGCA CTGTCTCGAT CCAGCATCGC CTGGGCAATC TGCACGAAAG CACCATTGCC
GGCTACGCCG TCGCCCACAA GGTCGAGGAG GTGATGATCG GCCTGGCGCT GTTGTCCGGC
CTGCCGGCCG ATGTCGTCGA GCGGGCGCTG TTCGACCGTA ATCGCGAGAT GCTGCTGATG
TTGGCCAAGG CGCTGCATTT CAGCTGGGAC ACGACCATGG CGCTGGCGTT CCTCGGCGCC
CGCGAGCATC GAATCACCGC CGGCGAGCTG CAGGATCTGG AGCGCGACTA TGCCCGCCTC
GACATGCAGG CCTCGCGCAG CGTCATCGAT TTCTATCAGT CACGGAAGAA TCCCGCCAAG
ACCGGACGCG AGCCGCGTGC TCTCGCCCAC TGA
 
Protein sequence
MNETHSILQD LEDAIARGTA DSRERALWHA TDLLIAGRYC EEEIATFGEV IGRLADEIET 
EARAKLAHRL ARIEYSPASV VRKLAFDDAI EVAGPVLRES ERLDDVALLE NARTKSQAHL
LAIAERKSLS PAVTDVLASR GNSAVANAVA RNQGAQFSGS GFLHMVQRAE NDSILAEHLG
RRLDIPRHLF QQLIAKASDD VGKRLAEERP ELVGEIHSSV ANIAGDLQSK FGPGSRNYFV
AKRTVSIQHR LGNLHESTIA GYAVAHKVEE VMIGLALLSG LPADVVERAL FDRNREMLLM
LAKALHFSWD TTMALAFLGA REHRITAGEL QDLERDYARL DMQASRSVID FYQSRKNPAK
TGREPRALAH