Gene BBta_5386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5386 
Symbol 
ID5150065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5609950 
End bp5610333 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content65% 
IMG OID640560142 
Producthypothetical protein 
Protein accessionYP_001241266 
Protein GI148256681 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.670212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CGATTTTCGG CCTGTCGCTG ACCGTGTTCG GACTTGGCGC GGCGCTGGCC 
CAGCAGCCGG CGATCAAGCG CACGCTGCTG CAGAAGACCG ATTTTCCGGA CGGTTATACC
ATCGTCCAGG CGATCGCCGA GGTGGCGGCC GGCGGCGCCG CGGGCCGGCA TACCCATCCG
GGCGTCGAGA CCGCCTATAT CCTGGAGGGC GAGGCGGATC TGATCGTCGA GGGACAGCCG
GACCGACGCC TGAAACCGGG TGATTCGTTC CAGATTCCCG CGGGCGTGGT CCATGACGCC
AAGGTTCATG GCGACAAGGG CCTGAAAGTG CTCGGTGTTT ACGTCGTCGA CAAGACCAGG
CCGCTCGCCT CGCCCGCGCC ATAG
 
Protein sequence
MKKTIFGLSL TVFGLGAALA QQPAIKRTLL QKTDFPDGYT IVQAIAEVAA GGAAGRHTHP 
GVETAYILEG EADLIVEGQP DRRLKPGDSF QIPAGVVHDA KVHGDKGLKV LGVYVVDKTR
PLASPAP