Gene BBta_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5290 
Symbol 
ID5149952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5520326 
End bp5521666 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID640560056 
Producthypothetical protein 
Protein accessionYP_001241180 
Protein GI148256595 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.130957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCG ATCCCTACAA AGACCGTGCG CGAGAGCTGG CCATCGAGGC CGGGCTCGAT 
CCGGATGCGC GGATCGAGCG GCCCGGGCAG CGCGCGATGC CGTTGTGGTG CACGTTCCGC
GACGCCGCGC GCAAGGAGCA GCTCGCGCGC GAGGCCAAGG CGCTGGCCGA TACGGTCGCG
AGCCGGCCGC AGGCGGCGCA GTATCAGAAC AGCCCGCTGA AGGTGTTCGG GAGCCACGAG
GAGGCAACCA TCGCGCAGAT GAAGAACTGC ATGAGCGTCG GCAATGCTGT CGCCGGCGTG
ATCTGTGCCG ACGGTCACCT CGGCTACGCC CAGCCGGTCG GCGGCGTGAT CGCCTATGAG
AAGCAGATCA GCATCTCCGG CGTCGGCTTC GACATCGGCT GCGGCAACAT GGCGGTGCGG
CTCGACACGC AGTTCACCGC GATCGAGGAC AAGGTCGGCA CGATCATCAA GGACGTGTCG
AAGGTGATCT CGTTCGGCGT TGGCCGCAAG AATGCTGAGC GTGTCGAGCA CGAGCTGTTC
GACGATGCCG ATGCCTGGCG GGAGTCCGAC ATGGACGCCT ACCGGCAGAA GGCGGTGGCG
CAGCTCGGAA CGGTCGGCTC GGGCAACCAC TATGTCGATC TGATGCGCGA CGAGAAAGGC
TTCGTCTGGG TCGGCGTGCA TTTCGGCAGC CGTGGCCTCG GCCACACTTC GGCGACGCGC
TACCTCAAGG CCGCCGGCGG CAAGGACGGC ATGAACGTGC CGCCCGCCGT CGTCGACGAG
GAGTCGGAGA TCGGGCAGCG CTACATCGCC GCAATGCAGC TCGCCGGGCG CTATGCCTAT
GCGGGCCGCG AGTGGGTGGT GGAGCGCGTG CGCCAGATCA TCGGCGGCGC GGTCACCGAC
AGCGTGCACA ACCACCATAA CTACGCCTGG CGTGAGACCC ACGACGGGCG TGATCTGTGG
GTGGTGCGCA AGGGCGCCAC GCCGGCCTTT CCGGGCCAGC GCGGCTTCGT CGGCGGCTCG
ATGGGCGACG ACGCGGTCAT CATCGAGGGC GTCGAGTCGG AGGAGGCGAA AGCCTCGCTG
TACTCGACGG TGCACGGTGC TGGCCGTCTG TTCGGACGGC GCGAGGCGAA GCGCCGCTTC
ACGCGTGTGG AGATGGACGA ATGGCTGCAG AGCCGCGGCG TCACCCTGAT CGGCGCCGAC
CTCGACGAGA GCCCGATGGC CTATCGCCGT CTGCCCGAGG TGCTGGCCGA GCACGCCGGC
TCGGTGAAGG TCGTGCACAC GCTGCAGCCG TTCGCCGTGG TGATGGCCGG CGAGGGCGAG
TTCGATCCGT TCAAGGATTG A
 
Protein sequence
MRADPYKDRA RELAIEAGLD PDARIERPGQ RAMPLWCTFR DAARKEQLAR EAKALADTVA 
SRPQAAQYQN SPLKVFGSHE EATIAQMKNC MSVGNAVAGV ICADGHLGYA QPVGGVIAYE
KQISISGVGF DIGCGNMAVR LDTQFTAIED KVGTIIKDVS KVISFGVGRK NAERVEHELF
DDADAWRESD MDAYRQKAVA QLGTVGSGNH YVDLMRDEKG FVWVGVHFGS RGLGHTSATR
YLKAAGGKDG MNVPPAVVDE ESEIGQRYIA AMQLAGRYAY AGREWVVERV RQIIGGAVTD
SVHNHHNYAW RETHDGRDLW VVRKGATPAF PGQRGFVGGS MGDDAVIIEG VESEEAKASL
YSTVHGAGRL FGRREAKRRF TRVEMDEWLQ SRGVTLIGAD LDESPMAYRR LPEVLAEHAG
SVKVVHTLQP FAVVMAGEGE FDPFKD