| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5287 |
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| Symbol | |
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| ID | 5149965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5517827 |
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| End bp | 5518666 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560053 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001241177 |
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| Protein GI | 148256592 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.308394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.294814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGG ACGATCTGCG CATCATCGCG GCGGTGCGCG ACGCCGGCAG TTATGCTGGC
GCCGGCGGCC GGCTGCGCAT CGACGAGACG ACGGTCGGGC GACGGCTGTC ACGCATCGAG
GCCGCGCTCG GCGTGCGCCT GTTCGAAGCC GTGGATGGCG CACGGCGCCC AACCGCGGCC
TGCACAACGG TGCTGGCGCA TGTCGATGCG ATGGCCGGTC ATGCCGCGGC GATCGCGCGG
AGTGCGGCGG ATCAGTCGGG ACCGAGCGGC CGGTTCCGGA TTGCCACGAC CGCAGCGGTT
GCAGAGAACG TGCTGGCGCC GCGCCTGGCA TCGCTGCTCG CGGCTCATCC CGGTCTGCTG
CTGCATCTTC TGACCGCCAG CCAGAATGTC AGCTTCTCGC GCTGGCAGGC GGATTTCGCG
ATCCGGCTGC GCAAGCCGGA GAAGGGCGAT TTCACCATCA CCCGGCTCGG CACCATCGCG
CTCTTTCTGA TCGAGCCTGC CGGCGCCGCG CCGAGCTTCG TCTGCGCCTA TCCGGACGAT
CTCGACGGCA TCCCGGAGCA GCAGGTCCTG AAACAGCGCG GGCTGTTCGC TGCGGCCCGC
TGCGTCACCG ACAATGTCCG CGTGATGTCG GAGCTGCTGC GGAGTGGCCA CGCCGCTGCC
GTGCTGCCTG AACATGCCTG CCGCGATCTG CTCGCCGATC AATCATTGCG CGTGACACAG
CTGCCGCGTC GGCGCGATGT CTGGCTGCTG GTGCAGACCC ATCTGAAGCG CGATGCGGCG
GCGCGGATCG TGATTGGCTG GCTGCGCGAG TGTCTTGCAG CGTATCAGGC GCGGGATTGA
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| Protein sequence | MNWDDLRIIA AVRDAGSYAG AGGRLRIDET TVGRRLSRIE AALGVRLFEA VDGARRPTAA
CTTVLAHVDA MAGHAAAIAR SAADQSGPSG RFRIATTAAV AENVLAPRLA SLLAAHPGLL
LHLLTASQNV SFSRWQADFA IRLRKPEKGD FTITRLGTIA LFLIEPAGAA PSFVCAYPDD
LDGIPEQQVL KQRGLFAAAR CVTDNVRVMS ELLRSGHAAA VLPEHACRDL LADQSLRVTQ
LPRRRDVWLL VQTHLKRDAA ARIVIGWLRE CLAAYQARD
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