Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5277 |
Symbol | |
ID | 5150830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5506634 |
End bp | 5507389 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560044 |
Product | putative oxidoreductase |
Protein accession | YP_001241168 |
Protein GI | 148256583 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.241792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.218182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG CGGCAAAGAA GATCGCGCTG GTGACGGGCG CAGGCACGGG TGTCGGCCGC GCCGCATCGC TGGCGCTGAT GAATTCCGGC TTCACCGTGG TGCTGGCCGG CCGCCGCAAG GAGATGCTGG AGGAGACCGC CAAGCTCGGC CCGGCTGGCA TGAGCCTGCC CGTCTCCGCC GACATGATGG ACCCCGCCTC GATCGCGGCG CTGTTCGACA TGGTCAAGTC GACCTATGGC CGACTCGACG TTCTGTTCAA CAATGCCGGC ATGGGCGCGC CGCCGGTCCC GTTCGAGGAT CTCACGATGG AGCAGTGGCA GTCGGTGGTC GCGACCAACC TCACCGCGCC GTTCCTGTGC ACGCAGCACG CCTTCCGCAT CATGAAGGAC CAGTCGCCGC GTGGCGGTCG CATCATCAAC AATGGTTCGA TCTCGGCGCA TGCGCCGCGG CCGTTCTCCT CGCCCTACAC CTCGACCAAG CACGCCATCA CCGGCCTGAC GAAAGCGTCG AATCTCGACG GCCGTGCCTA TGACATCGCG GTCGGCCAGA TCGACATCGG CAATGCCGAG ACACCGATGA CCGAGCGCAT GGTCGGCGGC GTGCTGCAGC CGGACGGCCG CATGATGCCG GAGCCGCGCA TGGACGTGAA GGCCGTCGGC GATGCCGTCG CCTACATGGC CGGCCTGCCG CTCAGCGCCA ACGTCCTGTT CATCACCGTG ATGGCCACCA AGATGCCGTT CGTCGGACGG GGGTGA
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Protein sequence | MAEAAKKIAL VTGAGTGVGR AASLALMNSG FTVVLAGRRK EMLEETAKLG PAGMSLPVSA DMMDPASIAA LFDMVKSTYG RLDVLFNNAG MGAPPVPFED LTMEQWQSVV ATNLTAPFLC TQHAFRIMKD QSPRGGRIIN NGSISAHAPR PFSSPYTSTK HAITGLTKAS NLDGRAYDIA VGQIDIGNAE TPMTERMVGG VLQPDGRMMP EPRMDVKAVG DAVAYMAGLP LSANVLFITV MATKMPFVGR G
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