Gene BBta_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5277 
Symbol 
ID5150830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5506634 
End bp5507389 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID640560044 
Productputative oxidoreductase 
Protein accessionYP_001241168 
Protein GI148256583 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.241792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.218182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG CGGCAAAGAA GATCGCGCTG GTGACGGGCG CAGGCACGGG TGTCGGCCGC 
GCCGCATCGC TGGCGCTGAT GAATTCCGGC TTCACCGTGG TGCTGGCCGG CCGCCGCAAG
GAGATGCTGG AGGAGACCGC CAAGCTCGGC CCGGCTGGCA TGAGCCTGCC CGTCTCCGCC
GACATGATGG ACCCCGCCTC GATCGCGGCG CTGTTCGACA TGGTCAAGTC GACCTATGGC
CGACTCGACG TTCTGTTCAA CAATGCCGGC ATGGGCGCGC CGCCGGTCCC GTTCGAGGAT
CTCACGATGG AGCAGTGGCA GTCGGTGGTC GCGACCAACC TCACCGCGCC GTTCCTGTGC
ACGCAGCACG CCTTCCGCAT CATGAAGGAC CAGTCGCCGC GTGGCGGTCG CATCATCAAC
AATGGTTCGA TCTCGGCGCA TGCGCCGCGG CCGTTCTCCT CGCCCTACAC CTCGACCAAG
CACGCCATCA CCGGCCTGAC GAAAGCGTCG AATCTCGACG GCCGTGCCTA TGACATCGCG
GTCGGCCAGA TCGACATCGG CAATGCCGAG ACACCGATGA CCGAGCGCAT GGTCGGCGGC
GTGCTGCAGC CGGACGGCCG CATGATGCCG GAGCCGCGCA TGGACGTGAA GGCCGTCGGC
GATGCCGTCG CCTACATGGC CGGCCTGCCG CTCAGCGCCA ACGTCCTGTT CATCACCGTG
ATGGCCACCA AGATGCCGTT CGTCGGACGG GGGTGA
 
Protein sequence
MAEAAKKIAL VTGAGTGVGR AASLALMNSG FTVVLAGRRK EMLEETAKLG PAGMSLPVSA 
DMMDPASIAA LFDMVKSTYG RLDVLFNNAG MGAPPVPFED LTMEQWQSVV ATNLTAPFLC
TQHAFRIMKD QSPRGGRIIN NGSISAHAPR PFSSPYTSTK HAITGLTKAS NLDGRAYDIA
VGQIDIGNAE TPMTERMVGG VLQPDGRMMP EPRMDVKAVG DAVAYMAGLP LSANVLFITV
MATKMPFVGR G