Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5251 |
Symbol | |
ID | 5154630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5474394 |
End bp | 5475947 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560021 |
Product | putative ABC transporter substrate-binding protein |
Protein accession | YP_001241145 |
Protein GI | 148256560 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0681352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGT CCTCGGCAGG GCTCGCGCCG GGGGCACTCG CGGCCGGCAA GAAGACGATC ACGGCGGTGA TGCATTCCGA TCTGCGCGTG ATCGATCCGG TGTTCACGCC GGCCTACATC ACCCGCGATC ACGGCTACAT GGTCTACGAC ACCTTGCTCG GCACCGACGC CAATTTCCAG GTGCAGCCGC AGATGGCGGA ATGGAAGGTC TCGGACGACA AGCTCACTTA CACTTTCACT CTGCGCGACG GCCTGAAATG GCACGACGGC CCGCCGGTCA CTGCGGAGGA CTGCATCGCC TCGTTGAAGC GCTGGAGCGT CAATGACAGC ATGGGCCAGA AGCTGATGGA GGCGACGGCC TCGCTCGAGG CCACCGATGC CAAGACGATC ACGCTGAAGC TGAAGCAGCC TTACGGCCTG GTTCTGGAAT CGATCGGCAA GCCGTCGTCC TACGTGCCGT TCATGATGCC GAAGCGTCTG GCCGAAACGC CGGCCAATCA GCAGATCACC GAGCAGGTCG GTTCCGGCCC GTTCAAATTC GTGAAGAGCG AATTCCAGCC CGGCGTGAAG GCGATCTATG AGAAGAACAC CGACTACGTG CCGCGCAAGG AGCCGCCGAG CTGGACGGCC GGCGGCAAGG TGGTGAAGGT CGACCGCGTC GAATGGATCT CGATGCCCGA TGCGCAGACG GCGGTGAATG CGCTGCAGGC CGGCGACATC GACTTCATGG AATTTCCGCC GATGGATCTG GAGCCGGTGC TGGCCGCCAA TCCCGATCTC ACCATGAACG TGCTGAACAA GTTCGGCTAT CAAACGCTGG GCCGGATGAA CTTCCTGTTT CCGCCATTCG ACAATGTGAA GCTGCGCCGC GCGGCGTTCC TGGCGCTGAA CCAGAAGGAC GTGCTCGACG CGCTGGTCGG CACGCCGAAA TTCTACCGCG TCTGCGGCGC GGTGTTCGGC TGCGGCACGC CGCTCGAGAC CGATGTCGGC TCAGAGACCC TGGTCAAGGG CAATGGCGTC GAGCAGGCCA AGAAGCTGCT CGCCGAGGCC GGCTACGACG GCACGCCGGT GGTCATCCTG GCGCCCGGTG ATGCGATCAC CTTGAAGGCC CAGCCGGTCG TCGCCGCGCA GCTGTTGCGC GCCGCCGGCT TCAAGGTCGA TCTTCAGACC ACCGACTGGC AGACCGTGGT GACGCGCCGC GCCAGCCAGA AGCCGCCGAA GGAAGGCGGC TGGAACATGT TCTTCACCAA TTCGGTGATC GCCGATTCCG GCAATCCGAT CGGCAGCACC TTTGTCAGCG CCCGCGGCCA GAAGAGTCCG TTCGGCTGGC CGAACGATCC GAAGATCGAG GAGCTGCGCG ACGCCTTTGC CCGCGCTCCC GGCCTTGCCG AGCAGAAGAA GATCGCCGCC GATATTCAGC AGGAGATCTA CGATCAGGTG ATCTACGTCC CGCTGGGCCA GTGGTTCGCA CCGAGCGCCT GGCGGAAATC GATCACCGGC ATGTTGGAAG GGCAGGCGGT GCCCGTGTTC TGGAACGTCG ACAAGAGCGA ATAA
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Protein sequence | MALSSAGLAP GALAAGKKTI TAVMHSDLRV IDPVFTPAYI TRDHGYMVYD TLLGTDANFQ VQPQMAEWKV SDDKLTYTFT LRDGLKWHDG PPVTAEDCIA SLKRWSVNDS MGQKLMEATA SLEATDAKTI TLKLKQPYGL VLESIGKPSS YVPFMMPKRL AETPANQQIT EQVGSGPFKF VKSEFQPGVK AIYEKNTDYV PRKEPPSWTA GGKVVKVDRV EWISMPDAQT AVNALQAGDI DFMEFPPMDL EPVLAANPDL TMNVLNKFGY QTLGRMNFLF PPFDNVKLRR AAFLALNQKD VLDALVGTPK FYRVCGAVFG CGTPLETDVG SETLVKGNGV EQAKKLLAEA GYDGTPVVIL APGDAITLKA QPVVAAQLLR AAGFKVDLQT TDWQTVVTRR ASQKPPKEGG WNMFFTNSVI ADSGNPIGST FVSARGQKSP FGWPNDPKIE ELRDAFARAP GLAEQKKIAA DIQQEIYDQV IYVPLGQWFA PSAWRKSITG MLEGQAVPVF WNVDKSE
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