Gene BBta_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5244 
Symbol 
ID5154796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5467381 
End bp5468112 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID640560014 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001241138 
Protein GI148256553 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.260319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.104577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAG TGTTGAACGT CAGTTCGCTG AGCAAGAGCT TCGGCGCCAT CAAGGTCGCA 
GACGATCTCA GTTTTCAGCT CGAACTGGGG GAATGTCTCG GCGTGATCGG TCCGAACGGC
GCCGGAAAGA GCACGCTGCT GAACCTGATC GTGGGCTTGA TCCGACCTGA CTCGGGTCGC
ATCATCCTCG ACGGCAGCGA CATCACCGGG CTGCGGCCGC ACCTTCGGGC GCGTCGCGGC
ATCGGCCGGG CTTTTCAGAT CCCGCAGCCT TTCCCGCATC TGACCGTCTA CGAAAACGTT
CTCGCAGCAG CCACCTTTGC CGGCGGAATG CACGAGGATG CTGCTGCGGA AGCGGCCATC
GAGGTGCTGC AACTGACGGC GCTGTTCGCC AAGGCGGAAC TGCTGGCTGG CGGGCTGCCA
TTGATTGATC GCAAGCGGCT TGAATTCGCC AAGGCGTTGG CATCCCAGCC GCGGCTCATC
CTGCTGGATG AAATCGCGGC CGGCTTGACG GAGCCGGAGG TCGCGCGTCT CACCGAGGTG
ATCGGCGGGG TCAAGGCCGG TTACGCCATG ATCTGGATCG AGCACATCCC GCACGCACTG
CGCGCGGTGG CGGACCGCAT TCTCGTGCTC GATTTCGGTC GCAAGGTGCT CGAAGGCGCG
CCGGGCGAGG TCATGGACAG TCCCGCGGTC AGGCGGATCT ATATGGGGTT TGCGGCTGAT
GACGTTGCTT GA
 
Protein sequence
MVEVLNVSSL SKSFGAIKVA DDLSFQLELG ECLGVIGPNG AGKSTLLNLI VGLIRPDSGR 
IILDGSDITG LRPHLRARRG IGRAFQIPQP FPHLTVYENV LAAATFAGGM HEDAAAEAAI
EVLQLTALFA KAELLAGGLP LIDRKRLEFA KALASQPRLI LLDEIAAGLT EPEVARLTEV
IGGVKAGYAM IWIEHIPHAL RAVADRILVL DFGRKVLEGA PGEVMDSPAV RRIYMGFAAD
DVA