Gene BBta_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5203 
Symbol 
ID5154997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5430228 
End bp5431451 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID640559976 
Producthypothetical protein 
Protein accessionYP_001241101 
Protein GI148256516 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.297257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA AGCCGGCGTC TCGACCGGCG GCGCCCGCGC GTCCGAGCGG GGATGGGGCC 
GCGGCGATTT CCTTTGCTCT CGTCAAAGGC GCGCCTGACG CCTGCGGACC GGGCTGCGAC
AGCTGGATCG CAGCCGAAGG CAAGATCGAC AACAGCGCCG CGGCGCGTTT CCGCAAGTTC
ATGAAGCAGA TCGGCGACCG TAAGCTGCCG ATCTACTTCA ACTCCCCAGG CGGCAATCTC
GAGCAGGCGC TCGCAATCGG CAACATTCTG CGTGAGAAGA AGGCCACCGT CCGGGTGGGC
CGCACCACCC TGCAAGAGTG TGGCTTTGAG CCCCAGGAGG GCGAGGCCTG CACCAGGTTG
AAGCAATCCG GGCGCGAGCT GCACGGCGAT GTCTGGACCC GCGGCGCGAT CTGCAACTCG
GCCTGTCCCT ACCTCATCCT CGGCGCGTCC TCGCGCGAGA TTGCTCCGGA CGTCACGCTC
GCGGTGCATT CGCCGCGGGT CATCCTGAAC TTCACCGGCG GGGTGCCGAG CCGCGAGCTC
AGGGCGCAGG CCATGCAGCG GGCGATGGAG CGCTCCGACA AGATGGTGCT CGGGTACATG
GCTCGGCTCG GCGCGGACCC GGGTCTGCTG ACGGTGGCGC GATCGGTGCC GTTCGAGGGC
ATGCGCATCC TGACCCGGGA GGAGATCGCG CGGTTTGCGC TCGATCGCCG CGACCGTGTG
GAAAGCTCCT GGATGTTCGA GGCCGCTGCC CGGGGCATTG TCTACAAGAC CATTCTTTCG
CGCCAGGACG GCGAGACCTC GTTCCGTACC ATGCGGCTGC AGCTGGTCTG CTTCGACCAG
GATCGCTTCG AGCTGGATGT CGAGCGCAAC GCGCCCACCG GACTTGGCGG TGCCGGCCTG
GTCTTGGCGA GCGGCAATGC CAAGCTCAAC TTCCTGTGGC CGCCGCGACG GTCCGGCGAC
CGCGAAACCT GGGGCGTCTT CCTGAACGCT GGTCAGATCA GGGCGTTGGC CGCGGCGCCG
CTGGTCGAGT TCGGCGATGC CGGAGCGAAT GCTGCGCGTC CCAAGCTCGG GCCGTTCCCT
GTTGCCAGCG ACGGGCTGCA GAGCGCGCTG AAGCGGCTGG CGGACACCTG TCCGCCGTCA
AAAGCGGTCG CTCAACCGCC CGGGGCGGCG GTTCCCCGGA CGCAAGGCTC GTCCCCACAG
GCGGCGGCTC AGCCGGCGCC ATGA
 
Protein sequence
MQAKPASRPA APARPSGDGA AAISFALVKG APDACGPGCD SWIAAEGKID NSAAARFRKF 
MKQIGDRKLP IYFNSPGGNL EQALAIGNIL REKKATVRVG RTTLQECGFE PQEGEACTRL
KQSGRELHGD VWTRGAICNS ACPYLILGAS SREIAPDVTL AVHSPRVILN FTGGVPSREL
RAQAMQRAME RSDKMVLGYM ARLGADPGLL TVARSVPFEG MRILTREEIA RFALDRRDRV
ESSWMFEAAA RGIVYKTILS RQDGETSFRT MRLQLVCFDQ DRFELDVERN APTGLGGAGL
VLASGNAKLN FLWPPRRSGD RETWGVFLNA GQIRALAAAP LVEFGDAGAN AARPKLGPFP
VASDGLQSAL KRLADTCPPS KAVAQPPGAA VPRTQGSSPQ AAAQPAP