| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5198 |
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| Symbol | |
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| ID | 5155000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5424787 |
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| End bp | 5426355 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559971 |
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| Product | outer efflux pump domain-containing protein |
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| Protein accession | YP_001241096 |
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| Protein GI | 148256511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0545953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTCA GGCCGCCAGC CGCGTCGTTC CGCCATCCCC GCAGCCGGCG CGCGCCGCAT
GGCTTTGCCC GGCTTGGACT CCGCGCGCTG GTTCTGGGCG TGACCGTCAG CGCCTGGTGT
CAGGCGGCGC CGGCCGAGGG GGCGGGAGCC CAGGCGCATC GGTCCAGCCG TCCACCTCCG
ATGCCGCAGA AGCGCGCCGC CGATGAGCAG GACAGTCCGA TCAAGGGCGC CACGCTGACG
CTCGCCGACG CCGTCTTTCT CGGACTGCGC GACAACCGCG CCATCAGGAG CGCCTATATC
GACAGGATCG CGCAGAAATT CGATCTTCGC GTCGCTGAGG ATCGTTTCTC ACCGCAATTG
GGCGTGTCCG GATCGGCGGT ACGCCAGTCG ATCGGTGCGA TCGGCACCAG CACCGTTCAA
GTCTCGCCGG GGGCCAGTAT CTTGCTGCCG ACCGGCGCGA CTCTCGGCTT CGCATGGAAC
ACCTCCTTCA CCGACGTCGC GGGGACCCAG ACGCGACGAT CGACCGCCGA CGTGACGATC
AGCCAGCCTC TGCTGCGCGG CGGAGGCACC GAGGTCACCA TGGCGCCGCT CGGAATCGCG
CGCCTGACCG AACGGATCAA TCGGCTCAAT CTCAAGCGGA CGGTCTCGAA CACGATCGGG
CAGGTCATTC TTGCTTACCG CAGTCTGCTG CAGGCGCAGG AAAGCTGGCA ATTGGCGCAG
AATTCGCTGA AGCGCGCCCG CGAGCTCGTC GACGTGAATC GGTCGCTGAT CCAGGCCGGC
CGCATGGCGG CGGTCGAGAT CGTCCAGAGC GAGGCCAATG TCGAGAACCA GCAGATCCGC
GTGCTCGCCG CGGCCAGGAG CATCGAGATC GCGCGTTTGA ATCTGCTGCA ATTGCTGTCG
ATCGATCTGG GGACTGCGGT GATCGCGGGA GAGAGCACCA GCCCTGAGCG CCTCCGCCCC
GATCTGCGCA ACGTCATGCG GATCGCGTTG TCGGAGCGAC CTGACTTCCT CGGGCAGCTC
TGTGTGGTGG AGCAGAACAG GCTCGGTCTC ACCGTCGCTG AGAACCAGAA GCTGTGGGAC
CTCTCGGTTT TCGCCAGCGG CAGCTTCGGC GGCAGAACAG TCACCAGCGC TGCGGCCAAA
GACAGCCAGC GCATCGCCGA TGGGGTCATC GGCGTGCAGT TCAACATGCC GCTGACCGGA
CTGCAGCGCG AGCAGCCGGC CGTACAGGCC TCGACCGCAC TGCGAACCTC CGAACTGCAA
CTCGCCGCGA TCCGGCAGGG TGTCGAGCTT CAGGTGCGCT CAGCGGTGAC CGATATCGAG
ATGTCCTGGA GTCAGCTCGA AGTGGCAAGA AAGGCCCGCA CTCTGGCTGA ACGCGCGCTC
GCCATCGAGA ACGAAAAGCT CCGGGCCGGC CGGTCGTCGG CGTTTCAGAT CCGCGCGTTG
GAGGCCGATC TTCGCGATGC CGAGCAGCAG CAGCTGAACT CCGCCATCGC TTACCTCAAC
GCTCTGACCA CGCTCGACAT GGCCCTCGGA ACGACGCTGA AGACATGGCA CATCGATCTC
GCGGACTAG
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| Protein sequence | MVLRPPAASF RHPRSRRAPH GFARLGLRAL VLGVTVSAWC QAAPAEGAGA QAHRSSRPPP
MPQKRAADEQ DSPIKGATLT LADAVFLGLR DNRAIRSAYI DRIAQKFDLR VAEDRFSPQL
GVSGSAVRQS IGAIGTSTVQ VSPGASILLP TGATLGFAWN TSFTDVAGTQ TRRSTADVTI
SQPLLRGGGT EVTMAPLGIA RLTERINRLN LKRTVSNTIG QVILAYRSLL QAQESWQLAQ
NSLKRARELV DVNRSLIQAG RMAAVEIVQS EANVENQQIR VLAAARSIEI ARLNLLQLLS
IDLGTAVIAG ESTSPERLRP DLRNVMRIAL SERPDFLGQL CVVEQNRLGL TVAENQKLWD
LSVFASGSFG GRTVTSAAAK DSQRIADGVI GVQFNMPLTG LQREQPAVQA STALRTSELQ
LAAIRQGVEL QVRSAVTDIE MSWSQLEVAR KARTLAERAL AIENEKLRAG RSSAFQIRAL
EADLRDAEQQ QLNSAIAYLN ALTTLDMALG TTLKTWHIDL AD
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