Gene BBta_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5186 
Symbol 
ID5153805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5414337 
End bp5415242 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID640559960 
Producthypothetical protein 
Protein accessionYP_001241085 
Protein GI148256500 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.914523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.554017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGTGA AATTGCTGCG GTCGCGTGAA ATGCGCTGGA TGCTTCTCGG TGTCGCTGCG 
CTTGGGACGG TGCTCGGTGG GGCGATTACC GTCATGTCCA ACTCGGCGCG CGCCGGGGGC
GCGCTCGAAG AGCGCAAGCT GCCGATGCGG TTCGAGTGGG TGGCCTGTGA GCCCAATTGC
GGCTGGGTCA GCGCGGTCGG CATCGTCACC GGTGACACGC CCAAGGATTT CGAGGAATTT
GCCAGGGAGC GTGATTTGAG CGGGGCGAGC CTCGTGCTCG ATTCCAGCGG CGGTTCGGTC
AACGACGCCA TCACTCTGGG ACGGCGGTTC CGCGCTCTGA AGCTGCGTAC CACGGTCGGC
ACGACGTTGC GGCCGAGCCG GACCAATGAC CGGCCGCGGG TGGCATCGGA AGCCTATTGC
GAGTCGATGT GCGTGTTCCT GCTGCTGGCC GGCACCACGC GCTACGTCCC CGACGCGGCT
CATGTGCGCG TCCACCAGAT CTGGATGGGC GACCGTGCCG ACGACGCCAA GGCCGCGAGC
TACACGGCGC AGGACCTCAT GATCGTCGAA CGCGACATCG GCCGTCTCGC CAAATACACG
TTCGACATGG GCGGGGCGGG GGATCTGCTG TCGCTGGCGC TGAACGTGCC GCCGTGGGAG
GATCTCCATG AGCTGTCGCG CGCCGAGCTG CGGCTGACCA ATCTCGTCAC CACCGACATG
ATTGCCGACG TGCTGCCGTC CAAGGGGACG GTGCCGGTGG CCGAACTCGC GCCGAAAGCA
CCCGAGAAGG CCAAGGACAA GCAGCAGGAC CGTTTCCCGG TGGCGACCGA TCGCGACAAG
GCACAGCTGT CGCGCACGGC GGAAGCCTTG CCGCCAGCCA CGGTCGCGGC GACCCCGCAA
CAATAA
 
Protein sequence
MGVKLLRSRE MRWMLLGVAA LGTVLGGAIT VMSNSARAGG ALEERKLPMR FEWVACEPNC 
GWVSAVGIVT GDTPKDFEEF ARERDLSGAS LVLDSSGGSV NDAITLGRRF RALKLRTTVG
TTLRPSRTND RPRVASEAYC ESMCVFLLLA GTTRYVPDAA HVRVHQIWMG DRADDAKAAS
YTAQDLMIVE RDIGRLAKYT FDMGGAGDLL SLALNVPPWE DLHELSRAEL RLTNLVTTDM
IADVLPSKGT VPVAELAPKA PEKAKDKQQD RFPVATDRDK AQLSRTAEAL PPATVAATPQ
Q