| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5155 |
|---|
| Symbol | |
|---|
| ID | 5153655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5389563 |
|---|
| End bp | 5390405 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640559931 |
|---|
| Product | putative rRNA methylase |
|---|
| Protein accession | YP_001241057 |
|---|
| Protein GI | 148256472 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.512859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0887365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC GCGACCGAAA GCCCCCATTT CCCCGCCAAG GCGGCAAATC TTCCGGCAAA
TTCGCCGGCA AGCCGCGCAA ATTCGAGCGT CCGCAGCCGT GGCGGGACCG CGAACAGGGG
TCGGACGGCC CTGTCATCCT CTACGGCTGG CACACCGTGA CGCTGGCGCT CGGCAATCCG
AAACGCAGGA TTCGCAAGCT GTATCTGACC GAAAACGCCG CGCGCCGGCT CGCCGACGAG
CGGATCGAGA CCAGAGTGAC GCCGGAGATC GTGCGTCCGA GCCAGATCGA CCAGCGGCTC
GGCCCGGACG CCGTGCACCA GGGCCTGCTC GCCGAAGCTG ATCCCCTGCC CTCGCCCGAC
ATCGACACGC TGGCGGCCGA GGGCATGATC CTGGTGCTCG ACCAGATCAC CGATCCGCAC
AATGTCGGCG CCATCCTGCG GTCGGCGGCG GCGTTCGACG TCAAGGCGAT CGTGACCACC
GCGCGCCACA GCCCGGAGGC CACCGGCGTG CTGGCGAAGT CCGCGTCCGG GGCGCTGGAG
CTGGTGCCGA TCATCACGGT GCAGAACCTC GCCCGCGCGC TGACACGGCT CGACGAGCGC
GGCTTCCAGA CGGTCGGCCT CGACAGCGCC GGCCCGACCG ACATCGCCGC GGTGGCGCTG
CGCGAGCCGC TGGCGCTGGT GCTCGGGGCC GAGGGCAAGG GCCTGCGGCA GTTGACGCGC
GAGACCTGCA GCGTGGTCGC CCGGCTCGAC ATGCCCGGCG CCATCAAGAG TCTCAACGTC
TCCAATGCCG CCGTGCTCGC GCTCTATATC GGCGCGAGCC GGCTTGGATT GATGCCCAAA
TGA
|
|---|
| Protein sequence | MSDRDRKPPF PRQGGKSSGK FAGKPRKFER PQPWRDREQG SDGPVILYGW HTVTLALGNP
KRRIRKLYLT ENAARRLADE RIETRVTPEI VRPSQIDQRL GPDAVHQGLL AEADPLPSPD
IDTLAAEGMI LVLDQITDPH NVGAILRSAA AFDVKAIVTT ARHSPEATGV LAKSASGALE
LVPIITVQNL ARALTRLDER GFQTVGLDSA GPTDIAAVAL REPLALVLGA EGKGLRQLTR
ETCSVVARLD MPGAIKSLNV SNAAVLALYI GASRLGLMPK
|
|---|
| |