Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5133 |
Symbol | |
ID | 5153685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5365333 |
End bp | 5365920 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640559909 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001241036 |
Protein GI | 148256451 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0406235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATTCGC TCATGCCCCT AGACATTTTG CCTCCGATCG CCGAGCACAT CATCGACGTC GCTGGCGGCC TGTTCTATCG CGAGGGCATC AACGCCGTCG GCATCGATCG CATTATCCGC GAAGCGGATG TGGCCAAGGC GACGATGTAC CGCCATTTCG AGAGCAAGGA CGATCTGATC GCGGCCTGCC TGACCCGCCG CCATGCCGCC GTCGTCGCGG CGCTCCAGGA CGGGTTGCGT CGCTCGCGTG CCAAGGGGAT CGACAAGGTC CTCACGATCT TCGACCTGCT CGCGGTCAAG GCGCGATCCG ACACGTTCCG CGGCTGCGCA TTCATGATCG CCACCGCGGA GAGCGGTGGC TCGGAGACGG TGCGGAAGAT CGCGCGCGAG CACAAGGACG CGGTGCGGGC GATCTTCTCG GGTCTTCTTC CGGTTACCTG GTCGCACCGC GACAAGGTCT CTGCGCGGCT CAATCTGCTG TATGACGGCG CGCTCGCTCA GATCCTGATC TATCAGGATG ACGGAGCCGT GCGCACTGCG CGCGATTGTG CAAAGGTGAT CCTGGAGGAC GCTGCGCGCA CCGCCTAG
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Protein sequence | MDSLMPLDIL PPIAEHIIDV AGGLFYREGI NAVGIDRIIR EADVAKATMY RHFESKDDLI AACLTRRHAA VVAALQDGLR RSRAKGIDKV LTIFDLLAVK ARSDTFRGCA FMIATAESGG SETVRKIARE HKDAVRAIFS GLLPVTWSHR DKVSARLNLL YDGALAQILI YQDDGAVRTA RDCAKVILED AARTA
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