Gene BBta_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4987 
Symbol 
ID5150172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5220985 
End bp5221326 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content67% 
IMG OID640559768 
Productputative insertion sequence transposase protein 
Protein accessionYP_001240897 
Protein GI148256312 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.607272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCGGC GACGGCGGCA TTGGTCGCGA ACTGACAAGG AGCGCATCGT CGCTGCAGCG 
TTGCAGCCGG GTGCGACGAT CCTGGGCGTG GCGCGCGCGT TCGGCGTGCA TTCCAGCCAG
GTGTTTCGCT GGCGCCAGCA GCTGTGCGGC AAGGAGACTG CCGTGCCCGG CTTCGCCGCT
GTGACGATTG CAGCCAATCC CGATCTTCAT GCAGCGGCAG CTCCGCCTCA GGGGCTGATC
GAAGTCGAGA TCGGGATTGA GATCAAGATC CGGATCAGCG GCGCGGCGGA CGCCGCGACG
GTGACAGCGG TGATCGCGGC GCTTCAGGCG GGCTCGCGAT GA
 
Protein sequence
MERRRRHWSR TDKERIVAAA LQPGATILGV ARAFGVHSSQ VFRWRQQLCG KETAVPGFAA 
VTIAANPDLH AAAAPPQGLI EVEIGIEIKI RISGAADAAT VTAVIAALQA GSR