| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4898 |
|---|
| Symbol | |
|---|
| ID | 5156033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5136892 |
|---|
| End bp | 5137461 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640559696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240826 |
|---|
| Protein GI | 148256241 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1510] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.231509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA CAACCGGCAA GAAGAAACTT CCTCCCGCCG TCGAGCGCTT CATCCTCAAT
TGGGGCGACA TGGGTGACCA ATGGGGCGTG AACCGCTCGG TGAGCCAGAT CCATGGTCTG
CTGTATCTGG CGGAGAAGCC GATGACGGCC GAGGACATCG CCGACACGCT CGGCATGGCG
CGCTCCAACG TCTCCAACTC GCTGAAGGAG CTGCTCGCGT GGGATCTGAT CCGCCGGGTG
CCGATCCTCG GCGACCGCCG CGACCATTTC GAGGCGGAGA CCGACATCTG GGAGGTGGCG
CAGCGGATCG CGGCGGGGCG CAAGGAGCGC GAGATCGATC CGGCGATCGC GGCGCTGCGC
GCCTGCGTGG CGGAGGCCAC CGGCGATCCC GGCATCAGCC CGGTCGCAAG CAAGCGGCTG
AAGGACATGC TGGCGTTCAC CGAACTTGTC GACCGCTGGT ACGTGCAGAT GCTGAAGGTG
CCGCGGCCGC GCCTGGTCGC GCTGATCAAG CTCGGCGAGA AGATTGCAAA CCTGCTGCCG
TCGGGACGAT CCCGGTCCGG CAGCGATTAG
|
|---|
| Protein sequence | MTETTGKKKL PPAVERFILN WGDMGDQWGV NRSVSQIHGL LYLAEKPMTA EDIADTLGMA
RSNVSNSLKE LLAWDLIRRV PILGDRRDHF EAETDIWEVA QRIAAGRKER EIDPAIAALR
ACVAEATGDP GISPVASKRL KDMLAFTELV DRWYVQMLKV PRPRLVALIK LGEKIANLLP
SGRSRSGSD
|
|---|
| |