| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4894 |
|---|
| Symbol | |
|---|
| ID | 5149308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5132789 |
|---|
| End bp | 5133646 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640559692 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001240822 |
|---|
| Protein GI | 148256237 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.658028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.130957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA CGCTCGACAT CGGTGCGGTC CGGGCCTTTC TTCTGGTCTC CGACCTGCAG
AGTTTCACGC GGACGGCGGA AGCGCTCGGC ACCACCCAGG CGGCCGTCAG CCTGAAGCTG
CAGCGCCTGG AGGCAACCTT GGAGAAACGC CTCCTGGAGC GTTCGCCGCG CGCGGTCCGG
TTGACGGCCG AGGGGGCGGC TTTCGTGGAG AACGCGCGCG CGCTCGTGGC CGCACATGAT
CTTGCCGTGG CCGGCCCCGC CCGCATCCGC CCCCGCCTCT CGCTCGGCAT CAGCGATCAC
GCGGCCGGCC CGGAGCTGGT GCCGATGCTG CGACAATTCC AGGCCAGCAC GACGGAGCTG
GCTCTGTCGG TGAGCATCGG GTTCTCGCGC GACCTGCTCG ATCTCTACGA TGCGGGCACG
CTCGACGCGG TCATCGTCCG GCAGGAGGCC TCGCGGCGCG GCGGCGAGAC CTTGGCCGAG
GACGAATTCG GCTGGTATGC GAGTCCGCGC TTCGGCTTTG CTTTGGGAAG TCCCGTGCCG
CTGGCGACTC TGGCCGCGCC TTGCGGCGTC CGCGCCATCG CGGTCCGCGC GCTCGACAAA
GCGCGGTTGC CCTTTGTCGA GAGCTTTGTC GGCGGCGGTG TCGCTGCTGT GGCCGCCGCC
GCACAGGCCG GACTCGCGAT CGCGCCCCTG GCGAGGCGAA TCGCGCCACC TGGCCTCGTC
GATGTCGGGC CAGCCCTCGG CCTGCCCAGG CTAGGACGAT CGAAGGTCAT TCTCCACGCC
AAGGTCAGCG ATGCTGCCAA ACGTGCGGCG CTGCGGACGC TGGCTGCGGC ATTGCGAAGC
GCGTCGCACG CGAATTAG
|
|---|
| Protein sequence | MKITLDIGAV RAFLLVSDLQ SFTRTAEALG TTQAAVSLKL QRLEATLEKR LLERSPRAVR
LTAEGAAFVE NARALVAAHD LAVAGPARIR PRLSLGISDH AAGPELVPML RQFQASTTEL
ALSVSIGFSR DLLDLYDAGT LDAVIVRQEA SRRGGETLAE DEFGWYASPR FGFALGSPVP
LATLAAPCGV RAIAVRALDK ARLPFVESFV GGGVAAVAAA AQAGLAIAPL ARRIAPPGLV
DVGPALGLPR LGRSKVILHA KVSDAAKRAA LRTLAAALRS ASHAN
|
|---|
| |