Gene BBta_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4875 
Symbol 
ID5153450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5115636 
End bp5116280 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640559672 
ProductHTH-type transcriptional regulator 
Protein accessionYP_001240803 
Protein GI148256218 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.256136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0946557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AGGTCGAGCG GACGCCGGAG AACGGCGCGT CGCTCTCGCC CAGTGGCGCG 
TTGCCGCCGG ACTCGCAGGC CGATCTTCAC ATCGTGCTCG GACGCAATTT GCGCCGCTTA
CGCACGCGGC GCGGCCATTC GCTGGAGCGG CTGGCGCGGC AGTCCGGGGT CAGCCGGGCC
ATGCTCGGGC AGATCGAAAC CGGCAAGAGC GTCCCGACCA TCAGCGTGCT CTGGAAAATC
GCCAATGCGC TGGATGTTCC CTTCGCCCAG TTGCTCGAAG GCGAGACGTC CCGCGGTCCC
TGCATCCTGC GCGGCTCCGA CGCCAAGCTC TTGAGCTCGA ATAGCGGCAA GTTCATCTCG
CGGGCGCTGT TTCCGTTCGA GGGCAGCCGG ACCGTGGAGT TCTACGAGCT GCGCATCGCG
CCGCTGCACC GGGAAACCGC GGAGGCGCAC GCACCGGGGA CGCGGGAGAA TCTGTTCGTG
GCGAAAGGCG TGATCGAGAT TGCGGTCGGC AGCGACAAGC CGATGACGCT CGCCGAAGGC
GATGCCGCGC TGTTCGAGGC CGATGCGCCG CATGTCTACC GCAACCTGGT GACCAGCGAA
GCGGTGCTCT ATCTCGTTAT GACCTATGCC GAGCGCGTCT CCTGA
 
Protein sequence
MSEQVERTPE NGASLSPSGA LPPDSQADLH IVLGRNLRRL RTRRGHSLER LARQSGVSRA 
MLGQIETGKS VPTISVLWKI ANALDVPFAQ LLEGETSRGP CILRGSDAKL LSSNSGKFIS
RALFPFEGSR TVEFYELRIA PLHRETAEAH APGTRENLFV AKGVIEIAVG SDKPMTLAEG
DAALFEADAP HVYRNLVTSE AVLYLVMTYA ERVS