| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4854 |
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| Symbol | |
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| ID | 5154781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5094317 |
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| End bp | 5095981 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559652 |
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| Product | putative ABC transporter (substrate binding protein) |
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| Protein accession | YP_001240783 |
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| Protein GI | 148256198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.441686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATG GTTTGCGAAC CCCGGCTCCG TCCCGGCGTG CCTTTCTCGC CGGCACTGCG
TCGCTGGCCA CGAGCGTGGC GCTTGGCAGC GGCGTGGGAG CCGTGCAGGC GCAGGGGACC
GCGCCCGTCA CCGGCGGACG GTTGGTCTAT CTCGAGCAAC AGGCTCACAC CAATCTCTAT
CCGCCGGCCG GCGGTTTCTA TCCGAACGGC GGCGTGCTCA ATCAGATCAC GGACAAGCTG
ACCTACCAGA ATCCGAAGAC GCTGAAGATC GAGCCGTGGC TCGCCGAGAG CTGGAGCTTC
AACGCCGACC GGACGGAGTA TGTCTTCAAG CTGCGTAAGG GCGTGACGTT CTCCGACGGC
ACCCCGCTCG ATGCGGCGGC CGTGGCCAAG AATTTCGACG TCTACGGCAA GGGCAGCAAG
GAGCTGCGTC ATCCGGTCTC CGAGGTGATC AACAACTATG CCGGAAGCGA GGTCGTCGAT
CCGCTCACCG TGCGGTTCCG CTTCAGCAAA CCGTCACCGG GCTTCCTGCA GGGGACCTCA
GTGATTGGCT CCGGGATCGT ATCGCCGGCG ACGCTGGATC GTCGTTTCGA TGAGCTCGGC
GACGCCACGA AGATCATCGG CAGCGGCCCG TTCGTGGTGG CAAGCGAGCA ACTCGGTCGC
GAGTTGGTGC TGGCCGCGCG CAAGGACTAC GCCTGGGCGC CGGCCAGCTC GGCCAATCAG
GGCCGACCCT ATCTTGACGA GATCCGCTAT ATCGTGACCG GCGAGGACAG CGTCCGCATC
GGCGCGCTGC TCGCCGGCCA GGCCGACGTC ATCCGCCAAG TGCAGGCTTA TGACGAAGCC
CAAGTCGAGA AGGCTGGCTA TCGGATCTAC GCGCCGTCGA CGCGCGGCGT GAACAACAGC
GTCGTGTTCC GCCCCGACAA TCCGCTGGTC GCCGACATCC GCGTGCGCCG CGCGCTGCTG
CATGCGACCA ACGCCAAGGA GATCGTGGAG TCGCTGTTCT CGGAGCACTA TCCGCAGGCG
ACCTCGGTCA TCGCCTCGAC GGCGCAGGGC TATGTCAACC TCTCGGACAA GCTGACCTTC
GATCCGGCCA AGGCGCAGGC GCTGCTCGAC GAGGCCGGTT GGAAGCCTGG CCGCAACGGC
GTGCGCCAGC GCGGTGCGCA GGAGCTCGCT CTGACGGCCT ATGAATCGCT GCCGCAGCCG
CAGAACCGCG CGACCTTGCA GCTGATCGCC CAGCAATGGG CGCGGGTCGG CGTGAAGCTC
ACGGTGCTCG CCGGCGATTC CGGCAGTCGC GCCACCGACG ATCTCGATCC GCTCAAGACG
CCGGTGTCGC CGGCCATGGT CGGGCGCGCC GATCCCGACG TCATCAAGAG CCAGTATCAC
TGGGAGAACC GCGACATGCT GCGGCAGAAG CCGGGCCGCG GCAAGGTCAA CGAATTCGTC
GACGCGAAGC TCAATGAGCT GCTCGAAGCC ATCGCAGCCG AGGTGAATGA GGAGAAGCGG
CTCGACTACG TGGTGCAGGT GCAGACCTAT CTGCTCGACC AGGCCTATGT CATCCCGATC
TTCGAGGAGC CGCAGGCGTT CGCGGCGGCG CCCTATGTCC AGGGGCTCGG CTTCGAGGCG
GTCGGGCGGC CGTCGTTCTA CAACACCTGG CTCGCCAAAC GCTGA
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| Protein sequence | MSDGLRTPAP SRRAFLAGTA SLATSVALGS GVGAVQAQGT APVTGGRLVY LEQQAHTNLY
PPAGGFYPNG GVLNQITDKL TYQNPKTLKI EPWLAESWSF NADRTEYVFK LRKGVTFSDG
TPLDAAAVAK NFDVYGKGSK ELRHPVSEVI NNYAGSEVVD PLTVRFRFSK PSPGFLQGTS
VIGSGIVSPA TLDRRFDELG DATKIIGSGP FVVASEQLGR ELVLAARKDY AWAPASSANQ
GRPYLDEIRY IVTGEDSVRI GALLAGQADV IRQVQAYDEA QVEKAGYRIY APSTRGVNNS
VVFRPDNPLV ADIRVRRALL HATNAKEIVE SLFSEHYPQA TSVIASTAQG YVNLSDKLTF
DPAKAQALLD EAGWKPGRNG VRQRGAQELA LTAYESLPQP QNRATLQLIA QQWARVGVKL
TVLAGDSGSR ATDDLDPLKT PVSPAMVGRA DPDVIKSQYH WENRDMLRQK PGRGKVNEFV
DAKLNELLEA IAAEVNEEKR LDYVVQVQTY LLDQAYVIPI FEEPQAFAAA PYVQGLGFEA
VGRPSFYNTW LAKR
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