| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4852 |
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| Symbol | |
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| ID | 5154779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5092482 |
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| End bp | 5093357 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640559650 |
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| Product | putative ABC transporter (permease protein) |
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| Protein accession | YP_001240781 |
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| Protein GI | 148256196 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.655706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG TGCAGTCTCC GGAAGGCTTC GCGACAGCGG ATCAGCCATC TGTCTCGTCG
GAGCGTTGGC GCGCCAGATT GCGCCGGCTG CGGCCGGGAC TTGTGCTGGC GTGGGCGACG
GTCGCGATCG CGGTGGCCTG GGCAACGCTG CCCTGGCTCT TCACCAGCTA CAGCCCGGTC
GATGGCGTTC CGCGGCAGCG GCGGCTTCCC CCGGGCGCGC TGCACTGGTT CGGCACCGAT
GAGCTTGGGC GCGATCTCTA TGCGCGTGTC GTCCATGGCG CGGTCCACAC GCTGAGCGGC
GCGCTGATCT CCGTCGCCGT CGGCCTGGCC ATGGGCACGC TGATCGGCCT GATCGCGGGC
TCGGTCGAGC GGCGGCTGGA CGATGCCATC ATGCGCGTGA TCGATGTGAT GCTCGCCGTG
CCCGCGCTGC TGCTGTCGCT CTCGATCATC ATCATTCTCG GCTTCGGCAC CGTGAACGCG
GCCATCGCGG TCGGCGTTGC CTCGATCGCG AGCTTTGCGC GGCTGGCGCG GTCCGAAGTC
GTGCGCGTCC GGCGCATGGA CTATGTCGAG GCGGCGTTCG GCAGCGGTGG GCGGTTCTTC
GCCGTGCTCT GGCGCCACGT GCTGCCGAAC TCGCTGACGG CGGTGCTGGC CCTGGCTGCG
CTGCAGTTCG GGCATGCGGT GCTCGCGATC TCCACGCTCG GCTTCCTCGG CTACGGCGCG
CCGCCGCCGA CGCCGGAATG GGGACTGTTG ATTTCCGAAG GCCGCAACTA CATCTCGACC
GCCTGGTGGC TCACCGTGTT TCCCGGCCTC GTTGTGGTCG CGGTGGTGCT CGCGGCCAAC
CGCATCGGTC AATCGCTCGT GCGGAGGACG CTGTGA
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| Protein sequence | MSIVQSPEGF ATADQPSVSS ERWRARLRRL RPGLVLAWAT VAIAVAWATL PWLFTSYSPV
DGVPRQRRLP PGALHWFGTD ELGRDLYARV VHGAVHTLSG ALISVAVGLA MGTLIGLIAG
SVERRLDDAI MRVIDVMLAV PALLLSLSII IILGFGTVNA AIAVGVASIA SFARLARSEV
VRVRRMDYVE AAFGSGGRFF AVLWRHVLPN SLTAVLALAA LQFGHAVLAI STLGFLGYGA
PPPTPEWGLL ISEGRNYIST AWWLTVFPGL VVVAVVLAAN RIGQSLVRRT L
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