| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4828 |
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| Symbol | |
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| ID | 5155797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5064949 |
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| End bp | 5067072 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559627 |
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| Product | ABC transporter |
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| Protein accession | YP_001240758 |
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| Protein GI | 148256173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
[COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.336043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTCGA CCCATACTTT CACGAAGCTG AGATATCGCT TCATCCCGGA CCACGTCATC
GGCGAACTGC TCTCGAAGAA GTGGATCGAC AACGCGATCC CGTTTCTGGT GCTGCTGTGC
GTGATCGCGA TCTTCGGCTC GTTGATCCCC AACTTCTTCG GCGGCGCCAA CCTCGCCATC
AGCGCCCGCG AGCTCGGTGA GTTCGGCCTC GTCTGCATGG CGATGATGGT CGTCATCATC
GTCGGCGGCA TCGATCTCAG CGTCGGCTCC AATTTCGCGC TCGGCAATTT CATGACATTG
GCGCTGCTCA ATCTCGGCGG CTGGCCGGTC GGCCTCGCGA TCCCCGCCGT CGTCCTGATC
TGCGGCGGCG TCGGCCTGCT CAACGGCTAC CTGATCGGCT TCCTCCGGCT ACGCGCCTTT
CTCACCACGC TGGTGACGCT CATCATCGTG CGCGCGATCG TCGACATGCT GCTCCTGAAA
TATGCGCAGG CGATGTCGGT CAGCTTCTAC CAGTCCGACG TCTGGGACAT GATCGGCCTC
GGCGGCGTCG CCGAGGTGCC TTCGAGCTTC ATCATCCTGG TGATCGTCGC GCTGATCGGC
CACGTGCTGC TGACGCGCAG CCGTCCGGGC TGGCGCATGA TGGCGATCGG CGGCTCGCGC
CGCTCGGCGC ACAACATTGG TCTTTCCGTC CGCGGTATGG TCTGCGCCGC CTATACGATC
TCCGGCATGC TGTGCGGTCT GGCCGGGGTG CTCTACGCGG CGCGGCTCAG CGGCGCCGGC
ACTGACACCG GCATGGGCCT GGAGATCTCG GCGCTGACGG CGGCCGTGCT CGGCGGCAAC
AGCCTCGGTG GCGGCCGCGG CTCGGTCGCC AAGGCGCTGA TCGGCGCCGT CATCGTGCTG
GTCATGACCA ATGGCGTGCT GCGCATCGGC CTGAACAGCG GTTCCGGCCC GATGGTGCTC
GGCCTGACCC TGCTGCTCGC CGTCTTCATC GACGTGCGCT GGCTGAAGAA CCGCGACAAG
CTGCTGTCGA AGGTCTACGT GTCGCCGACC TATGTCGAGC TGCCGACACC GCGCTCGACG
TCGGTCGAGA CCGGCGGCGC GTTCGCGCTC AATGACCGGC TCGGCCAGGT CGAGATCATC
GGCCTCGGCG AGGTCGAGTC GCCCGAGGAC GTCATCCTCG ATGACGACGA TTATCTCTAT
TGCGGCACGC GCCACGGCGA CATCGTCCGC TTCGCGCCGC CGGACTACAC GAGCTGGGAG
GTTTACGCTC ATATCGGCGG CTCGCCGCTC GGCATGGCCT TCGACCGCGC CGGCGACCTG
CATGTCTGCG TCGGCGGCAT GGGCCTCTAC AAGATCGACC GCGCGCGCAA CGTCGGCAAG
GTCACCGACG AGACCAATCG TTCGGCCTTC TCCGTGGTCG ACGATTCCCG GCTGCGGCTC
GCCGACGATC TCGACATCGC GCCCGACGGT CGGATCTATT TCAGCGAGGC CACGATCCGC
TACGAGATGC ATGACTGGCC GGTCGACGCG CTGGAGAGCC GCGGCAACGG CCGCATCATC
TGCTACGATC CGAAGAGCGG CAAGACACAT ACGGCGTTGC GCAACCTGAT CTTCCCGAAC
GGCGTCTGCC TCGCCCATGA TGGCCAGTCG GTGCTGTTCG CCGAGAGCTG GGCCTGCCGC
GTCAGCCGTC TGTGGATTGC AGGGCCGAAG GCAGGGCAGG TCGAGCGCGT GCTCGATGCG
TTGCCCGGCT ATCCCGACAA CATCAACCGC GCCTCGGACG GCTCCTATTG GTGTGCGATC
ATGGGCATGC GCTCGCCGGC GCTCGACCTC GCACTGCGCA TGCCCGGTTT CCGCCGCAGG
ATGGCGCGTC GCATCGCGCC GGACCAGTGG CTCTACCCGA ACCTCAACAT CGGCTGCGTG
ATCCGCTTCA ACGACAAGGG CGAGGTGCTG GAGTCGCTGT GGGATCAGGG CGCCAAGAAC
CACCCGATGA TCACCTCGAT GCGCGAGCAC CGCGGCTATC TCTATCTCGG CGGCATTACC
AACAACCGGA TCGGCCGCAT CAGGCTCGAC AAGGCTGATC CGAACTGGAG CGGCATGCGC
AGCTATTGGG GGCAGCGGGC ATGA
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| Protein sequence | MASTHTFTKL RYRFIPDHVI GELLSKKWID NAIPFLVLLC VIAIFGSLIP NFFGGANLAI
SARELGEFGL VCMAMMVVII VGGIDLSVGS NFALGNFMTL ALLNLGGWPV GLAIPAVVLI
CGGVGLLNGY LIGFLRLRAF LTTLVTLIIV RAIVDMLLLK YAQAMSVSFY QSDVWDMIGL
GGVAEVPSSF IILVIVALIG HVLLTRSRPG WRMMAIGGSR RSAHNIGLSV RGMVCAAYTI
SGMLCGLAGV LYAARLSGAG TDTGMGLEIS ALTAAVLGGN SLGGGRGSVA KALIGAVIVL
VMTNGVLRIG LNSGSGPMVL GLTLLLAVFI DVRWLKNRDK LLSKVYVSPT YVELPTPRST
SVETGGAFAL NDRLGQVEII GLGEVESPED VILDDDDYLY CGTRHGDIVR FAPPDYTSWE
VYAHIGGSPL GMAFDRAGDL HVCVGGMGLY KIDRARNVGK VTDETNRSAF SVVDDSRLRL
ADDLDIAPDG RIYFSEATIR YEMHDWPVDA LESRGNGRII CYDPKSGKTH TALRNLIFPN
GVCLAHDGQS VLFAESWACR VSRLWIAGPK AGQVERVLDA LPGYPDNINR ASDGSYWCAI
MGMRSPALDL ALRMPGFRRR MARRIAPDQW LYPNLNIGCV IRFNDKGEVL ESLWDQGAKN
HPMITSMREH RGYLYLGGIT NNRIGRIRLD KADPNWSGMR SYWGQRA
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