Gene BBta_4795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4795 
Symbol 
ID5154195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5019914 
End bp5021152 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID640559594 
Productputative D-amino-acid dehydrogenase 
Protein accessionYP_001240725 
Protein GI148256140 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCG CGATCGTTCT CGGAGGTGGC ATGGTCGGCG TCGGCACGGC GCTGCATCTG 
CAGAGCCGTG GCTGGTCGGT CGCCCTGGTC GACCGCAAGG AGCCGGGCCG CGAGACCAGC
TATGGCAATG CCGGGATCAT CCAGAGCGAG GCCGTCAGGC CCTATGCGAT GCCCTATGAT
CTCGCCGGTG TCCTCGACAT CGCGCTGGCA CGCACCAACG ACGTTCATTA TGAGCTGACG
GCGCTGCCCT ATCACATGCG GCCGCTGCTG CAATATTGGT GGAACTCGTT TCCCGCCCGC
CACGAGGTGC TGACACGCAC CTATGCGCAG TTGATCGCCC GCGCCGCGCC GGAACATGAG
CCGCTGATCA CCGCCGCCGG CGCCGGCAAT CTCGTGCGTC GCGACGGCTT TCGCGTGCTG
CACCGGAACC AGGCGCAGTT CGACAAGGAA GTGAAGGACG CCGAGGCCGT GGGGACGGCG
TTCGGCGTCA AGTTCAAGGT GCTCAGCGCA AGCGAGCTGG CCAAGGCCGA GCCAGGCCTC
AACGACAGCG GCATCGGCGG GCTGCATTGG CAGGAGCCGT GGACCGTGTC CGATCCCGGC
AGCCTGGTGA CGTCCTATGC TGAGCTGTTC GTGCGCCGCG GCGGCAAGCT CGTGCGCGGC
GATGCGACCA CGCTGGCCCA GCAGGGCAGC GGCTGGAGCG TCATCAGCGA TGAGGGCCGG
ATCGAAGCCG AGGCCGCGGT CGTGTCGCTC GGGCCGTGGT CGCCGACATT CCTGCAGCGC
TTCGGCTATG ATATCCCGAT GGTGCGCAAG CGCGGCTATC ATCGGCATTA CAGCGGCGGA
GCGCCGCTCG ACCTGCCGCT GCGCGATGCG GCGTTCGGCT ATCTGATGAA CCCGATGGCC
AAGGGCGTGC GCATCACCAC CGGCGCGGAG CTGTCGGCGC CGGACGCCGA ACTGACGCCG
GTGCAACTCG GCAAGGCCGA AGCTGCGGCA CGGCAGCTGA TCGATCTCGG CAAGCCGGTC
GAGCCGGAGC CCTGGCTGGG CACGCGGCCC TGCATGCCGG ACATGCTGCC GGTGGTTGGT
GAGACCGCGC GGCACAAGGG GCTGTGGCTG CATTTCGGCC ATGGTCATCA GGGCTTCACG
TTGGGGCCGG CGACCGGCCG TATCCTGGCC GAGCTGATGA GCGGCGAAGC GCCCAGCGTC
ACGGTCGATG CTCTCTCGCC GGCGCGTTTC GGTGCCTAG
 
Protein sequence
MRSAIVLGGG MVGVGTALHL QSRGWSVALV DRKEPGRETS YGNAGIIQSE AVRPYAMPYD 
LAGVLDIALA RTNDVHYELT ALPYHMRPLL QYWWNSFPAR HEVLTRTYAQ LIARAAPEHE
PLITAAGAGN LVRRDGFRVL HRNQAQFDKE VKDAEAVGTA FGVKFKVLSA SELAKAEPGL
NDSGIGGLHW QEPWTVSDPG SLVTSYAELF VRRGGKLVRG DATTLAQQGS GWSVISDEGR
IEAEAAVVSL GPWSPTFLQR FGYDIPMVRK RGYHRHYSGG APLDLPLRDA AFGYLMNPMA
KGVRITTGAE LSAPDAELTP VQLGKAEAAA RQLIDLGKPV EPEPWLGTRP CMPDMLPVVG
ETARHKGLWL HFGHGHQGFT LGPATGRILA ELMSGEAPSV TVDALSPARF GA