Gene BBta_4778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4778 
Symbol 
ID5154167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5005073 
End bp5005789 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID640559578 
Producthypothetical protein 
Protein accessionYP_001240709 
Protein GI148256124 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA TCGCTGGCGC CGTTGCCGTC ATCACCCTCT ATCTGTTGCT GCAGATGTTC 
CGGAACGCCA ACCCGGCCGC GCTGGCGCGC GCGATCAAGG TCGCCGGGGG CATCGGCTGT
CTGGCCGCCG CGGCCTTTAC CGGGATCAAG GGCGAGCTGG TGGTCGCCAT TCCCATCGGC
CTGTTTGGAG CGGGGCTGCT GGGCTGGAGC CCGGCTGGCC TCGGCAGCTT CGGAAACATG
TTCGGGCTGG GGTCGCAGCG CTCCGGCGGT CAAGGCTCGC GCGTGCGCTC GCAGTTCATC
GAGATGACGC TCGATCACGA CAGCGGTCGC GTGGAGGGAC GGTTCGTCGC CGGCGCGCAT
GCCGGCCGCG CGCTGGACGA ATTCGATCTG GCGCAGCTCG CGGCGACGAT TCCGAGTCTC
GACGCGGACA GCGTGGCTTT ACTTGAAACG TATCTGGACC GCCGGTTTCC CGGATGGCGT
CAGAACGCGC AGGGCGACGC GGCAGGGCGG CAGCGCCGCG CGGCGGCGAG TTCCAAAATG
ACGGACGAGG AGGCCTATCA GATCCTTGGC CTGCAGCCGG GCGCGGGGCG CGACGAGATC
GGTCGAGCCC ACCGTGCGCT CATGAAGAAA CTGCATCCCG ACCAGGGGGG GTCGACGTAT
CTCGCCGCGC GGGTGAACGA GGCCAAGGAT ACTCTGCTTC GTACGCATCA CGGCTAA
 
Protein sequence
MTLIAGAVAV ITLYLLLQMF RNANPAALAR AIKVAGGIGC LAAAAFTGIK GELVVAIPIG 
LFGAGLLGWS PAGLGSFGNM FGLGSQRSGG QGSRVRSQFI EMTLDHDSGR VEGRFVAGAH
AGRALDEFDL AQLAATIPSL DADSVALLET YLDRRFPGWR QNAQGDAAGR QRRAAASSKM
TDEEAYQILG LQPGAGRDEI GRAHRALMKK LHPDQGGSTY LAARVNEAKD TLLRTHHG