| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4759 |
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| Symbol | virR |
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| ID | 5153851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4985902 |
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| End bp | 4986390 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559560 |
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| Product | hypothetical protein |
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| Protein accession | YP_001240691 |
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| Protein GI | 148256106 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1720] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.637583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.317582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACTG ATACCGATCT CCGTTCGGGT GAAGTCGCGG TGGATGCGCC GCTGCCCCTT
GACGCGTCGT TGTATTTCAT TGGCCGCATC CGCACGCCCT GGACCTCGCG GCTGGAGACG
CCGCGGCAGG GCAGTCTGGA AGGACCGGTG TGCCGGCTCG AGATCTTCGA GCCCTGGGTG
GCGGCGCTGC AGGGGATCGA GGGCTTCAGC CATCTGCAGG TGCTGTACTG GCTCAACCAG
GCGCGCCGCG ATCTGGTCCG CCAGAGTCCG CGCCACCATG ACGGCGAGAC CCGCGGTACG
TTCGCATTGC GCTCGCCGGT GCGGCCCAAT CCGATTGGCG TCTCCACGGT GCGTTTCGTC
GCGCTGGAGG GCAGCACGGT GCTGGTGCGT GGTCTGGATT GTCTCGACCA GACGCCGCTG
ATCGATTTGA AGCCGGATCG CTGCGTGTTC ACGCCCGAGG CGGCGTCTGA CCACGATGAC
GGAAAATAA
|
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| Protein sequence | MSTDTDLRSG EVAVDAPLPL DASLYFIGRI RTPWTSRLET PRQGSLEGPV CRLEIFEPWV
AALQGIEGFS HLQVLYWLNQ ARRDLVRQSP RHHDGETRGT FALRSPVRPN PIGVSTVRFV
ALEGSTVLVR GLDCLDQTPL IDLKPDRCVF TPEAASDHDD GK
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