| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4686 |
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| Symbol | pdxJ |
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| ID | 5151986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4911661 |
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| End bp | 4912434 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559488 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001240620 |
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| Protein GI | 148256035 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.157176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.721299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC CTGCGAAGCC ACATCCTCCG AAGCTGCGCC TCGGCGTCAA TGTCGACCAC
GTGGCGACGT TGCGAAATGC CCGCGGCGGC CGCAGTCCGG ATCCGGTGCG CGCCGCGCTG
CTGGCCATCG AGGCCGGTGC TGACGGCATC ACCGCCCATT TGCGCGAGGA TCGGCGGCAT
ATCCGCGACG ACGACATGGC GCGCCTGAAA GCGGAAATCG CCAAGCCGCT GAATTTCGAG
ATGGCCGCGA CCGACGAGAT GGTGCGGATC GCGCTTGCAA CCCGCCCGCA TGCCTGCTGC
CTGGTGCCGG AGCGGCGCGA GGAACTGACC ACCGAGGGAG GCCTCGACGT GGTCGGCCAG
CACAATGCCC TGGCGCCCGC GATCGCCCGG CTGAACGATG CCGGCATCCG TGTCTCGCTG
TTCATCGCCG CCGATCCTGC GCAGATCGAG ATGGCAGCGC GCCTGCGCGC GCCGGTGATC
GAGATCCACA CCGGCGGCTG GTGTGATGCC ATCGCCGACG GCCATCACGA CAAGGCTGCC
ACCGAATGGG AGCGAATCGT CGCCGGCGCC CGGTTGGCCT ATTCCGCCGG CCTCGAGGTC
CATGCCGGCC ACGGGCTCGA TTATACGACC GCCGAGCAGA TCGCGGCTTT GCCGGAAATC
GTCGAGCTCA ACATCGGTTA CTTCATGATG GGGGAGGCGC TGTTCGTCGG CTTGCCCCAA
TCGGTGCGGT CCATGCGCGT GGCGATGGAT CGCGGCCGGA GCCGGGCGGC ATGA
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| Protein sequence | MSDPAKPHPP KLRLGVNVDH VATLRNARGG RSPDPVRAAL LAIEAGADGI TAHLREDRRH
IRDDDMARLK AEIAKPLNFE MAATDEMVRI ALATRPHACC LVPERREELT TEGGLDVVGQ
HNALAPAIAR LNDAGIRVSL FIAADPAQIE MAARLRAPVI EIHTGGWCDA IADGHHDKAA
TEWERIVAGA RLAYSAGLEV HAGHGLDYTT AEQIAALPEI VELNIGYFMM GEALFVGLPQ
SVRSMRVAMD RGRSRAA
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