| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4644 |
|---|
| Symbol | nusB |
|---|
| ID | 5149074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4870846 |
|---|
| End bp | 4871355 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640559446 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_001240578 |
|---|
| Protein GI | 148255993 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.187095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.435075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA GCAGCAACAA GCCGTTCAGG GGCCCGGTCA GAGCCAACGA CCGCAAGGCC
AACCGCCGCG GTGCGGCGCG ACTCGCCGCC GTGCAGGCGC TCTACCAGAT GGACATTGCC
GGCGCTGGCA TCAATGACGT GCTGGCCGAG TTCGAGAGCC ATTGGCTCGG CAGCGAGGTC
GAGGGCGAGC AGTATCTGCC CGCCGAGGCG GCCTTCTTCC GCGACATCGT CTCCGGCGTG
GTGCGCGACC AGACCAAGAT CGATCCCGTT CTCGACACTG CGCTGGAGCG CGGCTGGCCG
CTGCAGCGGA TCGAGGCCAT CCTGCGCGCC GTGTTGCGCG CCGGCGCCTA CGAGTTGGAG
CGCCGCAAGG ACGTGCCGGC GAAGGTCGTG GTGTCCGAAT ATGTCGACAT CGCCCATGCC
TTCGTCGAGC GCGACGAGAC CGGCATGGTC AATGCCGTGC TGGAGCAGTT GGCGCGGCAG
TATCGCGCCG ACGAGATGGG GCCGAAGTAG
|
|---|
| Protein sequence | MAESSNKPFR GPVRANDRKA NRRGAARLAA VQALYQMDIA GAGINDVLAE FESHWLGSEV
EGEQYLPAEA AFFRDIVSGV VRDQTKIDPV LDTALERGWP LQRIEAILRA VLRAGAYELE
RRKDVPAKVV VSEYVDIAHA FVERDETGMV NAVLEQLARQ YRADEMGPK
|
|---|
| |