| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4541 |
|---|
| Symbol | |
|---|
| ID | 5155919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4759571 |
|---|
| End bp | 4761076 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559341 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001240478 |
|---|
| Protein GI | 148255893 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.956339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.767935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACA GCCGCCCGCC TCTCCTGGAA CTGCAGGACA TCACCAAGTC GTTCGGCGGC
GTCACCGCCT TGCGCGGCGT CGATTTCACG CTACGCCCCG GCGAGATCCA TGGTCTCGTC
GGGGAGAACG GCGCCGGCAA GAGCACGCTG ATGAAGATCA TCGCTGGCGT GCACACCGGA
TTCTCCGGCC GTTTCCTGCT CGACGGCCGC GAGGTCCATT TCAACTCCGC CCGCGACGCC
CGCGCCGCCG GCATCGCCAT GGTGCATCAG GAGCTGAGTG TTGCCCCTGA TCTCACCGTG
GCCGAGAACG TGTTTCTCGG CAACCAGCCG ACCAATGCGC TCGGCATCGT CCAATGGCGC
CGGATGGCGC GCGAGGCGGC CGAGCAATTG AAGAAGCTCG GCATCGACGC CGATCCGATG
AGCCGGCTCG GCGACCTGCC GATCGGCGTG CAGCAGCTGA TCGAGATCGC GCGGGTGCTG
TTCTCCGGCG CCCGCATCAT CATCCTGGAC GAGCCGACCT CGGCGCTGTC GCCGCCCGAG
GTCGAGCGGC TGTTCGCAGC CCTGCGCAAG CTGCGCGAGC AAGGCACCGG GATCATCTTC
ATCTCGCATT TCATCGAAGA CATCCTGCTG ATCTCCGACG AGGTCACGGT GTTCCGCAAC
GGCCGCAAGA TCATGGAGAC GCGGGCAGCC GACACCAGCA AGGCAGCGCT GATCGAGGCC
ATGATCGGCA AGGGCCGCGA TGCGCTGGAG GGCAGCTACA CCCACGACAT CACCCTGCCC
GCGCCGCCGG CCGGCAAGCC CGTGGTGCTC GAGGCCGCGG GCTTGTCGCT GGCCCGCAGC
CTCAAGCGTG TGTCGTTCTC CGTCCAAGCC GGCGAGGTGC TCGGCATCTA CGGCTTCATG
GGCTGCGGCC AGCTCGAGCT AGCGCGGATC CTGTTCGGCA AGCTGGCGCC CGATGCCGGC
GAGCTGCGCC TGGCCGGCGA GCGCAACCGC TTCAAGAGCA CGGCCGATGC GCGCCGCGCC
GGCATCGCCT TCGTGCCGGA GAGCCGGCGC GACATGCTGT TCCTGCAGGA GCCCGTGTAC
AAGAACGTCT CAATCAGCAT CCTCGATCGC ATCAATGCCG TGTTGCTGAA GCCGTCGCGC
GAGCGCGCGC TCGCCAAGCG CCAGGTCGAG CAACTGCAGA TTCGTCCCGC CGATGTCGAG
ATCGATCTCG GCCTGCTCTC CGGCGGCAAC CAGCAGAAGG TCGCGCTGGC GAAATGGCTC
AGCCATCCGC CGCGGCTGCT GGTGCTGTGC GAGCCGACCC GCGGAATGGA TGTCGGCGCC
AAAAGCGACG TGATCGGAAT CGTCCGGCAG CTGCGCGACC AGGGCATTGC CGTCGTCGTG
CTCTCGACCG AGCCGGAGAC CGTGCTGTCG CTGGCCGACC GCGTCATCGT GCTCAAGCGC
GGCCAGGTCG TGCGCGAATT CGCCGGCGAG ACTATCAGCA AAGACCGTCT GCTCGAGGCG
GCGTAG
|
|---|
| Protein sequence | MSDSRPPLLE LQDITKSFGG VTALRGVDFT LRPGEIHGLV GENGAGKSTL MKIIAGVHTG
FSGRFLLDGR EVHFNSARDA RAAGIAMVHQ ELSVAPDLTV AENVFLGNQP TNALGIVQWR
RMAREAAEQL KKLGIDADPM SRLGDLPIGV QQLIEIARVL FSGARIIILD EPTSALSPPE
VERLFAALRK LREQGTGIIF ISHFIEDILL ISDEVTVFRN GRKIMETRAA DTSKAALIEA
MIGKGRDALE GSYTHDITLP APPAGKPVVL EAAGLSLARS LKRVSFSVQA GEVLGIYGFM
GCGQLELARI LFGKLAPDAG ELRLAGERNR FKSTADARRA GIAFVPESRR DMLFLQEPVY
KNVSISILDR INAVLLKPSR ERALAKRQVE QLQIRPADVE IDLGLLSGGN QQKVALAKWL
SHPPRLLVLC EPTRGMDVGA KSDVIGIVRQ LRDQGIAVVV LSTEPETVLS LADRVIVLKR
GQVVREFAGE TISKDRLLEA A
|
|---|
| |