| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4533 |
|---|
| Symbol | |
|---|
| ID | 5155935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4750940 |
|---|
| End bp | 4752166 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559333 |
|---|
| Product | BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_001240470 |
|---|
| Protein GI | 148255885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.883363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCA AAGCACGGCT CAGGAGCGGT CTGCTCGGAC TGGCGATCGC CGTTTTCGCT
CCGCTGACTG GTCACGCCCA GATGGCGCAT CAGCACGGCT CGGATGCGGC ATGCGAGGGC
ACCGAGCTCC GCTGCGCCAC CAAGGTCACG CCGTTCTTTG CGCAGGACGG TAAGCTCTGG
CTGGCTTGGA TGGCCGGTGG ACGGGTCTCG GTGGCGAGCT CGACCGACGC CGGCAAGACA
TATTCGGCAT CCGTGCCGGT CAGTGAGCAG CCGCTCAACC TCGACTGGGG GCCAGACGCC
CGGCCCAAGC TGGTGGTCGA CGGCAAAGGC GGCATCGCGG TGGCGTTCTC GATCTTCCGC
GACCAGGCCT TCAACGGGCA GGTGCTCACC ACCCGATCAG ACGATGGCGG CAAGAGCTTC
GCGCCGCCGC GCCCGCTCAC GGCGAACAAT GAGAGCCAGC GCTTCGAGGC GCTGGCGCTC
GACCAGGACG GTACGGTGTT TGTGGCGTGG CTCGACAAGC GCAACCGCGC TCCGGCGAAG
GCGGCTGGGC GCTCCTATGA CGGGGCTGGC TTGTTCTTCG CGTCGTCGCG CGATGGCGGC
GCAACCTACG CCGAGGCGAC GCTGGCCCAG GACAACACCT GCGAATGCTG CAGGCTCGGC
GTGGCGTTCG CCGGGCCCGG ACGCCCGGTG GTGATGTTCC GCAACATCTT CGATGGCGGT
GTGCGCGACC ATGCCGTGAT CACGTTCAGC GATCTCGCAA CGCCCGGCGA GCTGCATCGG
GTGAGCACCG ACGATTGGCA GATCAAGGCG TGCCCGCACC AGGGGCCCAG CCTGACCGTG
GCGCCGGGCG GCACTTACCA TGTCGCCTGG TTCACCAGCG GCAAGGTCCG CAAGGGGCTG
TTCTATGCGC ATTCGCGCGA CGGCGGACGA ACCTTCTCCG AGCCCCTGGC GATCGGGCAG
GCCGACCGCA ATCCGACGCG GCCTTATCTG CTGGCGACGC CCGAGGCCAC GACGCTGGTG
TGGAAGGAGT TCGATGGCGA GCGGACCACC GTCATGGTCA TGCAATCCAG GGACGATGGC
GAGACCTGGT CGAAGCCGCG GGCGGTCGCC AGCACGGACA ATGCGTCCGA CCATCCATTG
CTGGTCGCTC ATGGCGGCAA GGTGTTCTTG TCGTGGATGA CCAAGGCGGA CGGCTATCGG
CTGCAGGCGA TCGGAGACGA GTCATGA
|
|---|
| Protein sequence | MTSKARLRSG LLGLAIAVFA PLTGHAQMAH QHGSDAACEG TELRCATKVT PFFAQDGKLW
LAWMAGGRVS VASSTDAGKT YSASVPVSEQ PLNLDWGPDA RPKLVVDGKG GIAVAFSIFR
DQAFNGQVLT TRSDDGGKSF APPRPLTANN ESQRFEALAL DQDGTVFVAW LDKRNRAPAK
AAGRSYDGAG LFFASSRDGG ATYAEATLAQ DNTCECCRLG VAFAGPGRPV VMFRNIFDGG
VRDHAVITFS DLATPGELHR VSTDDWQIKA CPHQGPSLTV APGGTYHVAW FTSGKVRKGL
FYAHSRDGGR TFSEPLAIGQ ADRNPTRPYL LATPEATTLV WKEFDGERTT VMVMQSRDDG
ETWSKPRAVA STDNASDHPL LVAHGGKVFL SWMTKADGYR LQAIGDES
|
|---|
| |