Gene BBta_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4478 
Symbol 
ID5155233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4690285 
End bp4690851 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID640559283 
Producttranscriptional regulator 
Protein accessionYP_001240420 
Protein GI148255835 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAT TAATAGACGA TTTCAGCACC AGGCTCGCCC GCCGCATTCT GCTGGAGCGC 
GAGAGCCGCG GCTGGTCGCT GGCCGACCTT GCCGACCAGT CCGGCGTGTC CAAGGCGACG
ATCAGCAAGA TCGAGCGGGC CGAGGTCAGC CCCACCGCCG TCATCCTCGT CAAGCTGGCG
AGTGCCTTCG ATCTCACCTT GGCCGGCCTG ATGTTGCGCG CGGAGGCCCG GGCCGAGCGC
CTGTCGAGAG CCGACGACCG GCCGGTCTGG CGCGATCCCG ACACCGGCTA TCTGAGGCGA
CAGATCTTCC TGCGGCCGGA CCACCCGATT GAGCTCGTCA CCGTCGAGAT GCCCGCAAAG
GCAAGCCTGA CGCTGCCAGC CTCCTCCTAC ATCCATATCC GCCAGCTCGT CTGGGTGCAG
AGCGGGCGAC TGACGATCAC GGAAGGCACT GAGCGCCATG TGCTCGGGCC GGGCGACTGC
CTCGGCTTCG GGCCGCCGAT CGACACCACC TTCGCCAACG AGACCGACGC GCCTTGCGTC
TATGTGGTCG CCCTCGCCCG GAGCTGA
 
Protein sequence
MDQLIDDFST RLARRILLER ESRGWSLADL ADQSGVSKAT ISKIERAEVS PTAVILVKLA 
SAFDLTLAGL MLRAEARAER LSRADDRPVW RDPDTGYLRR QIFLRPDHPI ELVTVEMPAK
ASLTLPASSY IHIRQLVWVQ SGRLTITEGT ERHVLGPGDC LGFGPPIDTT FANETDAPCV
YVVALARS