| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4456 |
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| Symbol | ilvD |
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| ID | 5155635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4665152 |
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| End bp | 4666876 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559261 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001240398 |
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| Protein GI | 148255813 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.40325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA AGACCGACAT CAAGCGCAGG CTGCCCAGCC GTCACGTGAC GGAAGGGCCC
GAGCGTGCGC CGCATCGGTC CTATCTCTAC GCGATGGGCC TCACCACGGC TCAGATCCAT
CAGCCCTTCG TCGGCGTCGC CTCGTGCTGG AACGAGGCCG CGCCGTGTAA CATCGCGCTG
ATGCGGCAAG CTCAGGCCGT CAAGAAGGGC GTTGCCCACG CCGGCGGCAC GCCGCGCGAG
TTTTGCACCA TCACCGTCAC CGATGGCATC GCGATGGGCC ATGACGGCAT GCGCTCGTCG
CTGCCCTCGC GCGAGACGAT CGCTGATTCC GTCGAGCTGA CGATTCGCGG TCATGCCTAC
GACGCGCTCG TCGGTCTGGC CGGCTGCGAC AAGTCGCTGC CGGGCATGAT GATGGCGATG
GTCCGGCTCA ACGTGCCGTC GATCTTCATC TATGGCGGCT CGATCCTGCC CGGCAATTTC
CGCGGGCAGC AGGTCACCGT GCAGGACATG TTCGAGGCCG TTGGCAAGCA TTCGGTCGGC
CAGATGTCGG ACGACGATCT CGATGAGCTC GAGCGCGTCG CCTGTCCGTC GGCCGGCGCC
TGTGGCGCGC AGTTCACGGC CAACACGATG GCGACGGTCT CCGAGGCGAT CGGACTGGCG
CTGCCCTATT CGGCCGGGGC TCCGGCGCCT TACGAGATCC GCGATTCGTT CTGCATGACC
GCGGGCGAGA AGGTGATGGA GCTGATCGCG GCCAACATCC GGCCGCGCGA CATCGTCACG
CGGGCGGCGC TGGAGAATGC GGCGGCCGTC GTCGCGGCCT CCGGCGGCTC GACCAACGCT
GCGCTGCACC TACCAGCGAT TGCACACGAG GCAGGTATCA AGTTTGACCT GTTTGATGTC
GCCGAAATCT TCAAAAAGAC ACCTTATATC GCGGATTTGA AGCCAGGTGG CCGCTATGTC
GCCAAAGACA TGTTCGAGGC TGGTGGTATT CCGCTTCTGA TGAAGACGTT GCTCGACCAT
GGCTATTTGA ATGGCGACTG CCTCACAGTC ACCGGCCGGA CGATCGCCGA AAACCTCAAA
GGCGTGAAAT GGAATCCGCA CCAGGACGTG GTGAGGTCGG CTGATCAGCC GATCACTGCG
ACCGGTGGTG TTGTCGGTCT GAAAGGCAAT CTCGCGCCAG AGGGTGCGAT CGTGAAAGTC
GCGGGCATGT CGAACTTGAA ATTCTCTGGG CCGGCCCGCT GCTTCGATCG GGAAGAGGAT
GCCTTTGAGG CGGTGCAGAA GCGGACCTAT CGCGAAGGCG ATGTCATCGT CATCCGCTAT
GAGGGGCCGC GCGGCGGTCC CGGCATGCGG GAGATGCTGC AGACCACGGC GGCGCTCACC
GGACAGGGCA TGGGCGGCAA GATCGCGCTG ATCACCGACG GCCGGTTCTC GGGCGCGACC
CGTGGCTTCT GCATCGGCCA TATCGGACCG GAGGCCGCCA TCGGGGGGCC GATCGCCCTC
GTCGAAGACG GCGACATTAT CGAAATCGAC GCCGTCGCAG GGCGTCTCGA CGTCAAGTTG
AGTGATGCCG AACTCGCGGC ACGCAAGACC AAGTGGACGC CGCGTGAGAC ACAGCACACG
TCAGGTGCGC TTTGGAAATA TGCCCAGCAG GTGGGGCCGG CCGTTGCGGG CGCCGTGACC
CATCCAGGTG GTGCGCAAGA GAAACATTGC TATGCGGACA TCTGA
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| Protein sequence | MDAKTDIKRR LPSRHVTEGP ERAPHRSYLY AMGLTTAQIH QPFVGVASCW NEAAPCNIAL
MRQAQAVKKG VAHAGGTPRE FCTITVTDGI AMGHDGMRSS LPSRETIADS VELTIRGHAY
DALVGLAGCD KSLPGMMMAM VRLNVPSIFI YGGSILPGNF RGQQVTVQDM FEAVGKHSVG
QMSDDDLDEL ERVACPSAGA CGAQFTANTM ATVSEAIGLA LPYSAGAPAP YEIRDSFCMT
AGEKVMELIA ANIRPRDIVT RAALENAAAV VAASGGSTNA ALHLPAIAHE AGIKFDLFDV
AEIFKKTPYI ADLKPGGRYV AKDMFEAGGI PLLMKTLLDH GYLNGDCLTV TGRTIAENLK
GVKWNPHQDV VRSADQPITA TGGVVGLKGN LAPEGAIVKV AGMSNLKFSG PARCFDREED
AFEAVQKRTY REGDVIVIRY EGPRGGPGMR EMLQTTAALT GQGMGGKIAL ITDGRFSGAT
RGFCIGHIGP EAAIGGPIAL VEDGDIIEID AVAGRLDVKL SDAELAARKT KWTPRETQHT
SGALWKYAQQ VGPAVAGAVT HPGGAQEKHC YADI
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