| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4395 |
|---|
| Symbol | |
|---|
| ID | 5152365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4609793 |
|---|
| End bp | 4610608 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559204 |
|---|
| Product | putative transglycolase |
|---|
| Protein accession | YP_001240341 |
|---|
| Protein GI | 148255756 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0443848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTC GCGTCCTCTC CGCCGCCGCC CTCTGTGCTG CTGTGATGAC AAATTGCGCG
TCGGCGCAGT CTGCGGTCCC CTGTGGGACC GGCAATTTCG ATGCGTGGCT GGCGGAGTTC
AAGACCGAGG CCGCAGCCAA GGGCATTTCG CAGAACGCCA TCAACGCCGC CCTCACCGGC
GTGACCCCGG ATCAGAGCGT GCTCAATCGC GACCGCGGTC AGAAAGTCTT CAGCCAGACC
TTCGAGGAGT TTTCCGGCCG CATGGTGCCG CCGCGCCTGA CCCGCGGCTC CAACATGATG
AAGCAGTACG GCTCGGTGTT GTCCCGCATC GAGCAGACCT ATGGCGTGCC CGGCGAGGTG
CTGGTGGCGA TCTGGGGATT GGAGACGGAT TTCGGCGTCA ATGTCGGCAA GTTCCCGACC
ATCCGCGCGC TGGCAACCTT GGCCTATGAT TGCCGCCGGG CTGAGCAGTT CCGCGGCGAG
CTGCTGGATG CGCTGCGCAT CGTCGACCGC GGCGATCTCC AGCCGGCCGA GATGCGCGGA
GCCTGGGCCG GCGAGATCGG ACAGACGCAG TTCATGCCGT CGTCATGGAT CAAATACGCG
GTCGACTTCG ACGGCAATGG CCGCCGCGAC CTGATCCGCA GCGCGCCCGA CGTGCTCGCC
TCCACCGCCA ATTATCTGAA AGGCTACGGC TGGCAGAAGG GCAAGGATTG GGAGCCGGGC
AGTCCCAATT TCGCGGTCAT CCAGCAATGG AACAAGAGCG ACGTCTACGC CCGGACGATC
GCGACCTTCG CGACGCAACT GGCGCGGGCT CCATAG
|
|---|
| Protein sequence | MIRRVLSAAA LCAAVMTNCA SAQSAVPCGT GNFDAWLAEF KTEAAAKGIS QNAINAALTG
VTPDQSVLNR DRGQKVFSQT FEEFSGRMVP PRLTRGSNMM KQYGSVLSRI EQTYGVPGEV
LVAIWGLETD FGVNVGKFPT IRALATLAYD CRRAEQFRGE LLDALRIVDR GDLQPAEMRG
AWAGEIGQTQ FMPSSWIKYA VDFDGNGRRD LIRSAPDVLA STANYLKGYG WQKGKDWEPG
SPNFAVIQQW NKSDVYARTI ATFATQLARA P
|
|---|
| |