Gene BBta_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4343 
Symbol 
ID5152282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4561920 
End bp4564661 
Gene Length2742 bp 
Protein Length913 aa 
Translation table11 
GC content65% 
IMG OID640559157 
Producthypothetical protein 
Protein accessionYP_001240294 
Protein GI148255709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.363569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCCGG TCGAATTTCG AACGTTGCGC GACGGCCCGA GGGTGGCGCG ATGCGTGGAA 
AGGATTGCGA TGACGCGCTG GGGCGAGCTC CTGGAGGCGG CCAATCGAAG CCGGCCCCAT
CTCTTCGCCA ATTCGCCCCT GCCCTCGCGC GCCGCAGCTG CGCCGGACCC GACTGACGAA
GACCGGACTG CGGCGGGCCG CCTGCATATT CAGCTGGTTT CTCGCATCGC GACCCAGGCC
TTGCCCTATG TGGATGGCGA GGAGGTCGCG GCGCTCACGA GCGTCTATCA GCTGTTCAAG
GAGGCCCGGA CCATCTTCGA CGAGCACCCG CAATGCGGGC TGCTGAACGA CCTCGTCTGG
CACGTTCTCA ATGTCCATGT CCGGCCCTTC ACCGCCAAAT GGCACCGCCT GAGCGAGCGC
GGTGCGCTCG AGGCGCTGGA TGCGACCGAC ACATTCCGGG ACGAGTTGGC CCGATTGCAG
CCGATCCTGC GGCGTATGGA CGCGCTGCTC GTCGCCATCC GCGACGGCGC GCCGTTTGCC
GAGCCCGGCA TCGACGGCGC CATGGATCAT AACAAATCGA TCGCGGAGGA GATGAACGCA
TCACTCCCTT GGGGGATCGA CGAAAAGTTC GGCGGCCTGC CGCCCCGGGT CGCGGCCGGC
ATCAACAGCG CCGAGCGCGC CGCCATTGCG CATCGCCGCA CGCTTTATGC GGCGCGGCTT
GCCGCGCAGG GACGGACAGC GCCCGAGCAG GATTGGACGG AACGGCCCCA TGCCGCAGCC
CTTGCCATTT CCGGCGGTGG CATCCGCTCG GCGACCTTTG CGCTCGGGGT CCTGGTCGCC
CTCGCCCGGC GCAATCTGCT GTTTCAGTTC GATTATCTCT CCACGGTCTC GGGCGGCGGC
TATATCGGCG CGTTCATGAC GACCTTCCTG AGCAGCCAAT TTCTGAGCAG CGAAACCACA
GCCGGGCCAC CGCTCGGCCT GCTGCGCGAC GACCTGCCGT TTCAGCGCGA GGATGGCGAG
GCGGCCGCGT TGCGACATGT CCGCCATCAT AGCAAGTACC TCGCCACCGG CAGCGGCGTC
GAACGGCTGC AGATCGCGTT CGCGCAGGTC TATGGCATGG TGATGAACGG GCTCGGCGTT
ATCTACCTCG CGGCCATCGC CGCTGTTGTC GAGTATATGC TGCGGCTTGC TCTGCCGCCG
GCCGCGTTCT GGCCCACGCC CGTATTGATC GCGGGCGCTG CGCTTCTGCT CACCCCGTTC
GTGCTGCCCC TGCTGTGGCG GCGCCCGGCT CATCGCAGCA TGGCCGACCG GCTGCTGCTC
GTCCTCTGCC TGATCCTGAT TGTCCTGCTG GCGTGGCATG GGCTCGGCTG GCTTCACCAC
AACCTCAGAT GGCACCCGCT CTATCTGTTG ATCCCGCTCG CACCGCTGCT TGCTTCCGCG
ATGCTCGCGC TGTCCGGCCG CATGGCGGCT CCGCTTCGCA TCCTGTTGTA CATTGTGTCG
TGGGTCGCGC TGCCGCTGGT CGTCGTCGGA GCGGAGCTCA TCATCTATGA TCAGCTCGAT
GGCAACACCG TGTTGCCGGT GCTTGGAGCA ACCAGCAACA TCTTCATCGC CGGCGTCCTG
GTCGCGATCG GCTTCTGGCT GTTCTGCGAC CTGTTCGACA TCAACTTCAC CGCGCCGCAC
CGCCACTACA AGAAGAAGCT CGCCGAGGCC TATCTCGTGC AGCCCGATCC CGCCGACCCG
CTCGGTCCTC TCAGGCAGAA CGTGTCGGTC CCGCTCTCGA GCTGCAACGA AGCCGGGCGC
GGCCCGTATC ATCTGATCAA CTGCGCGCTG AACGTGCCCG CCTCCAAGGC GTCCCGCATG
CAGGGACGGT TGACGGATTT CTTCCTGTTC AGCAGGGACT TTTGCGGCAG CCCCCTCACC
GGCCACCAAC CGACCGACGC GTGGGAACGT CTCAATACCG ATCTCGACAT TGGGACGGCG
ATGGCGATCT CCGGCGCGGC CGCGGCGCCG CAGATGGGCA CTGGCACGAT CAAGTCGCTC
AGCTTCTGGC TGGCGCTGTT CAACATCCGG CTCGGCCATT GGATCAGGAA TCCCGGCCAC
GCACGTGCCG CCGAGGTGGG TCCGCCCGGC CTGTCCTACC TGCTGCAGGA GGTCTTAGGC
CAGGCCGACG AGACCAGGCC CTTCCTCAAC GTCTCCGATG GCGGCCACAT CGAGAATCTC
GGCGTGTACG AGCTGCTGCG CCGGCGCTGC AAATATATCG TCGCGATCGA CGGCGAGCAG
GACGCGCAGA TGACGTTTCA CGGCCTGACG ACCCTGCAGC GGCTGGCCGC GATCGACCTC
GGTGTCACCA TCGAGATCGG GCTGGATGCG CTGCGGCTGA GCAAGACGAG CGGACTCAGC
CACTCGCATT TCGCCTTCTG CCGCATCCGT TATCCGAACG CCGAACGCGG CGGCAGCGAG
AGCTTCGGCT ATCTGATCTA TCTCAAGCTG TCGCTGACCG GCAATGAAGG CGAGTTCATT
CGTCGCTACC GGCTGGACGA GCCGGACTTC CCGCACCACT CCACCGCCAA TCAGTTCTTC
ACCGAGGCCC AGTTCGAGGC CTATCGCAGT CTCGGCGAGC ATGTCGGGGA CAAGCTGTTC
CTGTCTGCGA TCGTCGGACC CGGCATGTCG CGCTCCTCCG AGGTCTGGAT CGAACCGTGG
TTTCACGCCA TCGGACAGAA CCTGCTGACG CCGCAGCCCT AG
 
Protein sequence
MFPVEFRTLR DGPRVARCVE RIAMTRWGEL LEAANRSRPH LFANSPLPSR AAAAPDPTDE 
DRTAAGRLHI QLVSRIATQA LPYVDGEEVA ALTSVYQLFK EARTIFDEHP QCGLLNDLVW
HVLNVHVRPF TAKWHRLSER GALEALDATD TFRDELARLQ PILRRMDALL VAIRDGAPFA
EPGIDGAMDH NKSIAEEMNA SLPWGIDEKF GGLPPRVAAG INSAERAAIA HRRTLYAARL
AAQGRTAPEQ DWTERPHAAA LAISGGGIRS ATFALGVLVA LARRNLLFQF DYLSTVSGGG
YIGAFMTTFL SSQFLSSETT AGPPLGLLRD DLPFQREDGE AAALRHVRHH SKYLATGSGV
ERLQIAFAQV YGMVMNGLGV IYLAAIAAVV EYMLRLALPP AAFWPTPVLI AGAALLLTPF
VLPLLWRRPA HRSMADRLLL VLCLILIVLL AWHGLGWLHH NLRWHPLYLL IPLAPLLASA
MLALSGRMAA PLRILLYIVS WVALPLVVVG AELIIYDQLD GNTVLPVLGA TSNIFIAGVL
VAIGFWLFCD LFDINFTAPH RHYKKKLAEA YLVQPDPADP LGPLRQNVSV PLSSCNEAGR
GPYHLINCAL NVPASKASRM QGRLTDFFLF SRDFCGSPLT GHQPTDAWER LNTDLDIGTA
MAISGAAAAP QMGTGTIKSL SFWLALFNIR LGHWIRNPGH ARAAEVGPPG LSYLLQEVLG
QADETRPFLN VSDGGHIENL GVYELLRRRC KYIVAIDGEQ DAQMTFHGLT TLQRLAAIDL
GVTIEIGLDA LRLSKTSGLS HSHFAFCRIR YPNAERGGSE SFGYLIYLKL SLTGNEGEFI
RRYRLDEPDF PHHSTANQFF TEAQFEAYRS LGEHVGDKLF LSAIVGPGMS RSSEVWIEPW
FHAIGQNLLT PQP