| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4337 |
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| Symbol | |
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| ID | 5150658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4546637 |
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| End bp | 4548622 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559152 |
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| Product | putative toxin/protease secretion system |
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| Protein accession | YP_001240289 |
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| Protein GI | 148255704 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.165043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TCAACGACTT CCGGCCCTTC GATGACGAAG ATTATGTGCG GCCGAAGACG
CGCGCGGTCG GACCGCAGGG CGATGCCCTG ATCCTCGAGC TGCAGCGGCT GCAGGGTGCC
TTCGACGACG GCTCGGATGC CGATCCGCGC GACAATCGCG GATCCCGCAA GAAGCGGCGC
GCGCCGCCAT CGGCGGTGCG CAACAAATCA CCCCGCACCA AGAAGCGGCC GGGCAAGATG
GGACGGGCGC TCGGGGCGTC GCTGTCGCTG CTCGGCTTCC GCAGCGCGAC CGCCCGACCG
CAACGCGCGT CCGGCATCCG CGAGATGGAG TGGCAAGACC AGGCCCAAGG CCAGCTGCAA
GGCCAAGTGC ACGGCCACGC GCCAGCCATG CGATCACGCG AACCCGAATT CTCACCGCCG
CCACGTCAGC AGCAGACGCG CCCGCCAACC CATGATGCAG CCCTGCTCGA CCTGCGGAAC
GCCAATCGCG ACGGCAATGT CGGCGGCGGA GCCCTGCGCG CGATGCCGCA GCATAACGTT
CCGGCGCGCG TCGACCATGC ATACGCCGTT CCGCAAACCC GCGTCGGACG CATCGTCGGC
ACCGCCGGCA CGGCGCTGAC CACAGGCATG ACGTTCATTG CGGCCCAGGG AACGGCGGCT
GCGCTCGATG GCCCATCGGA CGAACCGCTC GTGCCGCGGG TCGGCCGCAT GTTCGAGAAC
GAGTTGCGTC TCGGCTTGCG TGTGCTGCTC GTGGCCGCGG TGCTCGGCGG CGGCTGGTTG
ACCCTGGTGC CGCTCGCCGG CGCCATTGTC GTGCCGGGCA ATCTCGTGGT GCAATCCAAC
GTCAAGGCGA TCCAGCATCC GACCGGCGGC ATCATCGCCG AGATCAAGGT CGACAACGGC
AAGCGGGTCA CCGCCGGCGA TCTGCTGGTC CGGCTCGATG CGACGCAGAG CCAGGCGCAG
CTGCAGGCGA TCACCAAGCA GTTGAACGAG CAGCGCGCCA AGATCGCCCG GCTCTCGGCG
GAGCGCGACG GCCTCGATCA GCCGGAATAT CCGACATCGC TGACGTCACG TCCGGACGAT
GCACATGTCC GCGCCGTGAT CGCATCGGAG AACGCGCTGT TCAAGGCGCG CGCGACCACC
CGCAAGAGCC AGAAGGAACT GCTGCAGGGC CGCATCGTCC AGCTGAACAA CGAAATCAGC
GGCATGGAGT CCCAGCTCGA TTCGAAGAAC AAGCAGATCG AGCTCATCAA GGGCGAACTC
GCCGGTGTGC AGGAACTCTA CGACAAGCGT CTCGTCCCAC TCACGCGATT GACGACGCTG
CAGCGGGAAG CCGCGCGAAT CGACGGCGAG CGCGGCCAGC TGGTGTCGAG TGTGGCGGAG
ACGAGGTCCA AGATCAGCGA AGCCGAGCTC CAGACGGTCA AGATCGATCA GGACTTCCGC
AGCGAAGTCG TCAAGGATCT CGGCGACGCG CAGGCCAAGG AGGGCGATCT GGTCGAGAAG
GGCGTTGCGG CACGGGATCA GCTGGACCGC ATCGAAATGC GCGCACCGAA TTCCGGCACC
ATTCACCAGC TCGCCGTGCA CACGATCGGC GGCGTGATCA AGCCTGGCGA GACCATCATG
GAGCTCGTCC CCGATTCCGA TGAGCTTCAG GTCGAGGCGC ATGTGCAGCC CAAGGACATT
GATCACGTCC ACACCGGACA GAACGCGATG GTGCGATTCA ATGCGTTCAA CCAGCGCACG
ACGCCGCAGC TGAGCGGTCA GGTCTCATTC GTCGCCCCCG ACATCACCAA CGATCCGAGA
TCGGGCTCGA CCTTCTACAC GGTGCGGATC ACCCTGTCCG AGGAGGAGCG GCAGCGGCTC
GGCGGCGTCA ATCTGATGCC GGGCATGCAG GCCGAAGTCT ACGTCCAGAC CGGAAGCCGA
ACGATGCTGA GCTATTTGAT GAAGCCGATC ACCGACCAGT GGCGGCGCGC CTTCGTCGAG
CAGTAG
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| Protein sequence | MKHINDFRPF DDEDYVRPKT RAVGPQGDAL ILELQRLQGA FDDGSDADPR DNRGSRKKRR
APPSAVRNKS PRTKKRPGKM GRALGASLSL LGFRSATARP QRASGIREME WQDQAQGQLQ
GQVHGHAPAM RSREPEFSPP PRQQQTRPPT HDAALLDLRN ANRDGNVGGG ALRAMPQHNV
PARVDHAYAV PQTRVGRIVG TAGTALTTGM TFIAAQGTAA ALDGPSDEPL VPRVGRMFEN
ELRLGLRVLL VAAVLGGGWL TLVPLAGAIV VPGNLVVQSN VKAIQHPTGG IIAEIKVDNG
KRVTAGDLLV RLDATQSQAQ LQAITKQLNE QRAKIARLSA ERDGLDQPEY PTSLTSRPDD
AHVRAVIASE NALFKARATT RKSQKELLQG RIVQLNNEIS GMESQLDSKN KQIELIKGEL
AGVQELYDKR LVPLTRLTTL QREAARIDGE RGQLVSSVAE TRSKISEAEL QTVKIDQDFR
SEVVKDLGDA QAKEGDLVEK GVAARDQLDR IEMRAPNSGT IHQLAVHTIG GVIKPGETIM
ELVPDSDELQ VEAHVQPKDI DHVHTGQNAM VRFNAFNQRT TPQLSGQVSF VAPDITNDPR
SGSTFYTVRI TLSEEERQRL GGVNLMPGMQ AEVYVQTGSR TMLSYLMKPI TDQWRRAFVE
Q
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