Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4295 |
Symbol | |
ID | 5150302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4499204 |
End bp | 4500547 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640559114 |
Product | hypothetical protein |
Protein accession | YP_001240251 |
Protein GI | 148255666 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.33353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00229611 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGACAT TCCGACATGC AAAGCTGGCC GTGAGGCTAT CTTTGGGGGC GGCGCTCGCG TTCGGGCTCG CAACCAGCCT GCCGGCGAAA GCCGACGAGC AGTTCTTTCC GCTGCAGAGC TATCGGGTCG GTCCCTATGC GGCCGGCGGC ACCGGCTTCT TCGGCGGCTT CATCGACTAT CTCAATTTGA TCAATATTCG TGACGGCGGC GTCAATGGCG TCAAGCTGAC CTGGGACGAG GGCGAGACCC AATATGAGGT CGAGCGCGGC GTCGAAGTCT ATGAGCGGCT GAAGGGCCGG CCGGGGGTGG CGGCCTGGAA TCCGCTCTCC GTCGGCATCG CCTATGCGAT GATCGACCGT ATCAGCAAGG ACAAGGTGCC GCTGATCACC ATCAACCACG GCCGCACCGA TTCCACCGAT GGCCGGGTGT TCCCCTACGT GTTCCCGCTG CTGCTCAATC CCTACAGCGA GACCTCAGGC ATCGTGAATT ACATCGCGAC GCGCGAGGGT GGGTCCGAGA AGCTCAAGGG CAAGAAGATC GTCGTGCTCT ATCACGGCTC GCCTTACGGC AAGGAGACGA TTCCGATCTA CAAGCTGCTC GCGGACAAAT ATGGCTTCGA GCTCGAGCAG ATCGAGGTGC CGCATCCCGG CAATGAGCAG CAATCGCAAT GGCTGTCGAT CCGCCGCGCC AAGGCCGATT ATGTCGTGCT GCGCGGCTGG GGCGTGATGA ATCCGGTGGC GCTGAAGACG GCGCAGAAGG TCGGCTTTCC CGTCGACCAC ATCATCGGCA ATGTCTGGTC CAACTCGGAA GAAGACGTGA TCCCGGCCGG CGACGCCGCC AAGGGCTATG TCGCAATCAC CACCCAGGCC TCCGGCGCCG AATATCCGGT GCTGCAGGAG GTGATCAAGA CCGTCTACGG CGCCGGCAAA GGCAATCTCG ACGACAAGAA GCGGATCGGC AGCGTCTACC ACAATCTCGG TATCGTGAAC GGCATCCTCA ATGTCGAGGC GGTCAGGATC GCGCAGGAGA AGTTTGGCAA ACGCACGCTC ACGGGCGACG AGGTGCGCTG GGGCTTCGAG CATCTCGCTC TCGATCCCGC CCGCGTCGAG GCGCTCGGCG CCAAGGGCCT GTTCCACTCG ATCAACGTCA CCTGGGACAA TCACGAGGGC AATGGCCGCG TGACCTTCCA GCAATGGGAC GGCGCCAAGT GGAAGGTCGT CTCAGACTGG ATCTCGCCAG ACTGGGCAGC GCTGCGGCCG ATCATCGAGA AGTCGTCGAC GGCCTATGCG CAGGAACGCG GCATCAAGAT CCGCACCTCG GGGGATGACC CTGTCGGTCA ATGA
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Protein sequence | MTTFRHAKLA VRLSLGAALA FGLATSLPAK ADEQFFPLQS YRVGPYAAGG TGFFGGFIDY LNLINIRDGG VNGVKLTWDE GETQYEVERG VEVYERLKGR PGVAAWNPLS VGIAYAMIDR ISKDKVPLIT INHGRTDSTD GRVFPYVFPL LLNPYSETSG IVNYIATREG GSEKLKGKKI VVLYHGSPYG KETIPIYKLL ADKYGFELEQ IEVPHPGNEQ QSQWLSIRRA KADYVVLRGW GVMNPVALKT AQKVGFPVDH IIGNVWSNSE EDVIPAGDAA KGYVAITTQA SGAEYPVLQE VIKTVYGAGK GNLDDKKRIG SVYHNLGIVN GILNVEAVRI AQEKFGKRTL TGDEVRWGFE HLALDPARVE ALGAKGLFHS INVTWDNHEG NGRVTFQQWD GAKWKVVSDW ISPDWAALRP IIEKSSTAYA QERGIKIRTS GDDPVGQ
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