| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4235 |
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| Symbol | |
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| ID | 5149089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4448224 |
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| End bp | 4450488 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559059 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001240196 |
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| Protein GI | 148255611 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.507157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.848747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCC GGCGCGTGGC GATCGGCCTG GGCTTGGGAA CCTTGCTTGC GGTGGGATCC
GCCTCCGTGG CCCTCGACCT GAAGTCGCGC GATGACGCAG CCCTGGTCGA TCACACCATG
GAAGTGCTGC AAAAATCGTC CGATCTGCGG CTGTTGCTGC GCCAGGTCGA GAGCGCCTCG
CGGGCCTTCG CGCTCACCGC TGACGATCGT TTCGTGGCCG AGTTCCAGGA TGCGCGACAA
CGGGTTCCCG CGGCGCTCGC GGATCTGCTC CACGCGGTGA ACGACAACGC GGCCCAGGTC
ACCCGATTGA CATCCATCGA CGAGGTGGTG AAGCGCCGCC TCGATTTGTC GGGCAGGCTC
ATCCAGCTTC GGGCCGCGAA CAATCAGGCA GCGCTCGACA ACCTGCTCGC GGGTGGACCC
GGACGCGCGG CGATGGCGAC GATCACCGCA ACGCTGGACG CCTTCAATGC GGAGGAGCGG
CGGCTGCTCG CGGCGCGCAC GGAAACCTCG CAGCGCACCG GCGCGTGGCT GCTGATGATC
GACCTGACAG GGGTCGGGGT GCTGCTGCTG ATCGCAGCCT ACCTCATTCG GCGCGCCTAC
ATGTCGGATC GAACGCTGCG CTCGTCGCTC AGCCGGTCGC AGGCCACAGC AATGTCGCTC
GAGGCCCAGG CCCTGCAGCA ACGTGGCGAA CTCGCTGTCG CCTATGACGA GCTGCGGCGA
TCCTCGGCGA TCCTGGAGAA CACCTTCAAC AGCATGGCGG AAGGCGTGCT GGTGGTGGAT
CCGGACGGCA CCATCGTGTT GTCGAACCCG GCCGTCGGCG ATTTTCTCGG AACGCAAACA
GGCCGGACAT TCGCCCAGAT GGTGGTCGAG AACCGGTTCT TCGAGAACGA CGGCATCACA
CCGATCCCGG ACGACGACTT GCCGATCGCG ACCGCCCTGC GCGGCCTGTC ATTCGATCGC
CGCGAGGTGG TGGTGAAGCC GGCCGATGGT CGTGCACAGG CGCGGCTGAT GGTGAGCGGG
CGGCCGTTGC GCAATTCTGC GGGCGCGATC AGCGGTGCCG TGCTGGTGTA TCACGACGTC
ACCGAAGTGC ATGAAACCGA GCGACTGCTG CAGCAGGCGC AGAAGCTCGA TGCGATCGGC
AAGCTCACCG GCGGCGTCGC GCACGACTTC AACAACATGC TGACCATCAT CACCGGGTCG
ATCGAGGTGC TGATCGACAC GGTGCAGGAT CGCCCGGCGG CCGCCGAGCT GGCGGCGTTG
ATCAGCAGGG CCGCCGACCG CTGCACCGAG CTGATCCGCC ATCTGCTGGC CTTCGCGCGC
AAGCAGCCGC TGCGGCCGCG CGACATCGAC GTCAATGCGA CCGTGCAGGA CATCGCCAAG
CTGCTCCGGC CGACGCTGGG CGAGCAGATC GAGATCAAGG CGATTCTCGC CGAGGAGGAG
CTGGTCGCCC ATGTCGATTC GGCGCAGCTC GCCAATTCGC TGGTCAACAT GGCGATCAAT
GCCCGCGACG CGATGGCCGA TGGCGGCAAG CTGCTGCTGG AGACGCAGAG TGCCGCGCTC
GATGCGACCT ATGCTGCCGC CAATCCCGGC GTGGTGCCGG GCCGCTACAT CATGGTCGCC
GTCAGCGACA CCGGCAGCGG CATGCCGCAG GAGGTGCAGA ACCGCGCTTT CGAGCCGTTC
TTCACCACCA AGGAGGCCGG CAAGGGCTCC GGCCTGGGGC TCAGCATGGT CTACGGCTTC
GCCAAGCAAT CAGGCGGGCA CGTCAAGATC TACAGCGAGG AGCATCGCGG CACCACGATC
CGGCTGTATC TGCCGCCGGC GCAGGCGGCG GAGCAGGTCG CCGCCGAGCC GGACATCGCG
CTGCCGACCG GCCATGAGAC GATCCTCGTC GTCGAGGATG ACCCGCTGGT GCGCAGCTTC
GTGCTGGCCC AGCTGCAGAG CCTCGGCTAC ACCACGCTGT CGGCCGCGCG CGGCCGCGAG
GCGCTGGCGA TCGTCGATGG CGACCAGCCG TTCGAGCTGC TGTTCACCGA TGTCATCATG
CCCGGTGGCG TGAGCGGCCG GCAATTGGCG GAGGCGGTGC AGGCCAAGCG CCCATCGGTC
CGCGTGCTCT ATACGTCCGG CTATACCGAC AATGCGATCC TCGAGCACGG CCAGTTGCTC
TCGGAGGCAC TGCTGCTGAC CAAGCCGTAT CGCCGCGCCG AGCTCGCGCA GATGGTGCGG
CGGGCGCTCA GCCCCGCGTC GCCAGCGCCA CTGCGGCCAG CGTGA
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| Protein sequence | MIRRRVAIGL GLGTLLAVGS ASVALDLKSR DDAALVDHTM EVLQKSSDLR LLLRQVESAS
RAFALTADDR FVAEFQDARQ RVPAALADLL HAVNDNAAQV TRLTSIDEVV KRRLDLSGRL
IQLRAANNQA ALDNLLAGGP GRAAMATITA TLDAFNAEER RLLAARTETS QRTGAWLLMI
DLTGVGVLLL IAAYLIRRAY MSDRTLRSSL SRSQATAMSL EAQALQQRGE LAVAYDELRR
SSAILENTFN SMAEGVLVVD PDGTIVLSNP AVGDFLGTQT GRTFAQMVVE NRFFENDGIT
PIPDDDLPIA TALRGLSFDR REVVVKPADG RAQARLMVSG RPLRNSAGAI SGAVLVYHDV
TEVHETERLL QQAQKLDAIG KLTGGVAHDF NNMLTIITGS IEVLIDTVQD RPAAAELAAL
ISRAADRCTE LIRHLLAFAR KQPLRPRDID VNATVQDIAK LLRPTLGEQI EIKAILAEEE
LVAHVDSAQL ANSLVNMAIN ARDAMADGGK LLLETQSAAL DATYAAANPG VVPGRYIMVA
VSDTGSGMPQ EVQNRAFEPF FTTKEAGKGS GLGLSMVYGF AKQSGGHVKI YSEEHRGTTI
RLYLPPAQAA EQVAAEPDIA LPTGHETILV VEDDPLVRSF VLAQLQSLGY TTLSAARGRE
ALAIVDGDQP FELLFTDVIM PGGVSGRQLA EAVQAKRPSV RVLYTSGYTD NAILEHGQLL
SEALLLTKPY RRAELAQMVR RALSPASPAP LRPA
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