| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4117 |
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| Symbol | |
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| ID | 5154618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4325229 |
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| End bp | 4326569 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558948 |
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| Product | ABC transporter substrate-binding protein, periplasmic component |
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| Protein accession | YP_001240086 |
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| Protein GI | 148255501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.16072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.345232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGGA GGAAGCTGAA CCGCCGACAA TTCGTTGCTG CGACCGCTGC CAGTTCCGCG
GTCATGATCG CCGCCCCCTA TGTTCGCGGC GCCTATGCCG CAGGCAAGCT CTCGATGGGA
TTCTGGGACC ACTGGGTTCC CGGTGCCAAC CAGGCCTCGA CCGATCTCGT CAATGAGTGG
GCCGCCAAGG AAAAGGTCGA GGTGTCGATC GACTACATCA CCAGCCAGGG CAAGAAGATC
GAGCTGACCA TCGCCGCGGA AGCCGCGGCG AAATCGGGAC ACGATCTGAT CGCGATGCCG
ACCTGGTGGC CGCATGCGCA TGCCGAGCTG CTCGAACCGG TCAACGACAT CATGGGACCG
ATCATCCAGG AGAACGGCGA GGTGAACGGC ACCGTCAAGT ATCTGGGGCA ATCGGGCGGC
AAATGGCTCG CGGTGCCCGC CTGCGTCGGC AGCCAGATCA AGGGTCCCTG CACCCGCATC
GACCTGATGA AGAAGCACGC CGGGATCGAC GTGCAGGAGC TCTACCCGGC CGGCAGCCCG
CCGAAAGCGG ACAGTTGGAC GACGGAAACT TTCCTGAAGG CGGCGGAAGC CTGCCAGAAG
GCCGGCGTTC CCTTCGGCAT CGGCCTCGGC GAGACCACCG ATAGCGTCGA TTCCGCAGGC
GCCTTTTTCC AGGCGTTCGG GGCCGAGCTG GTCAATGCCA AGGGCGATGT CACCGTGAAG
ACCGACGCCG TCCGCCAGGC GCTCGAATTC TACAAGCGGC TGATCGCGGC GCTGCCGCCG
GATGTCGCCT CATGGGACGA CGCCTCGAAC AACAAATGGC TGGTGTCGGG CAAGGGCGCC
ATGATCATGA ATCCGCCAAG CGCCTGGGCG GTGGCCAAGC GCGACGCGCC GCAGATCGCC
GAGCAGTGCT GGACCCACGG CTTCCCGGCC GGACCGAAGG GCCGCTTCGC GCCATTCCTG
CCCTACTTCT GGAGCGTCTG GTCGTTCTCC AAGAACAAGG AGGCCGCCAA GAGTCTGATC
GTCCATCTGT CCAAGCCAGC CTCGATCGAG AAGATGGTGG TCGCCAGCGG CGGTTATGAC
CTGCCAGCCT ATGAGAAGCT GACCACGCTC AAGGTCTGGC AGGAGCAGGG ACCGCCAAAG
GGTACGCTCT ATCACTACCC CAATCCCTAC AATCATCAGA CGCTGTCGAT CGCGGCCTCC
CCTGCTCCGC CCAAGATCGC GCAGCAGATC TACGCACAGG CGACGATGAC CAAGATGTGC
CTGCGTTATG CCCAGGGCGA GAAGATGGAA ACGACGCTCG CCTGGGCCGA GGGCGAGTGC
GAAGGCTTCA TGCGCAGCTG A
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| Protein sequence | MSRRKLNRRQ FVAATAASSA VMIAAPYVRG AYAAGKLSMG FWDHWVPGAN QASTDLVNEW
AAKEKVEVSI DYITSQGKKI ELTIAAEAAA KSGHDLIAMP TWWPHAHAEL LEPVNDIMGP
IIQENGEVNG TVKYLGQSGG KWLAVPACVG SQIKGPCTRI DLMKKHAGID VQELYPAGSP
PKADSWTTET FLKAAEACQK AGVPFGIGLG ETTDSVDSAG AFFQAFGAEL VNAKGDVTVK
TDAVRQALEF YKRLIAALPP DVASWDDASN NKWLVSGKGA MIMNPPSAWA VAKRDAPQIA
EQCWTHGFPA GPKGRFAPFL PYFWSVWSFS KNKEAAKSLI VHLSKPASIE KMVVASGGYD
LPAYEKLTTL KVWQEQGPPK GTLYHYPNPY NHQTLSIAAS PAPPKIAQQI YAQATMTKMC
LRYAQGEKME TTLAWAEGEC EGFMRS
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