Gene BBta_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4076 
Symbol 
ID5150378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4273971 
End bp4275707 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content67% 
IMG OID640558909 
Producthypothetical protein 
Protein accessionYP_001240048 
Protein GI148255463 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.567075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCTCTC CACACCTGAG CGGGCCTAGA TCCAAAGCAA GAGAGACTGA CATGAAGACG 
ATTCAAACCC AGGTCCTCAT CGTGGGCGCC GGTCCGGTCG GACTGACCGC CGCCATGGAC
CTTGCCTCGC GCGGCATCGA CGTCGTGGTC GCCGAAATCA GGCGCGCCGG CGAGCCGCCC
AACGTCAAAT GCAACCACGT TTCCGCGCGT TCGATGGAAG TGTTCCGCCG TCTCGGCATC
GTCCGGGAGG TCCGGGAGGG CGGCCTGCCG GCCGACTTTC CGAACGACTG TGCCTATCGC
ACCGCGGTCG TCGGCCGCGA ACTGACGCGC ATTCCGATCC CATCCCGCCA GGACCGCTAC
ACGGCGACGG GAGGACCGGA CACCGATTGG CCGACGCCGG AGCCGCCCCA CCGCATCAAC
CAGATCTATC TCGAGCCCAT CCTGTTCGCC TGTGCGCAGG CGCAACGCGA GATCCGAATT
CTCAACCGGG TCCAGCTCGA TCATTTCGAC CAGCGCGACG ACGGCGTGAT CGCGCGGGCG
CGCGATCTGG ACGCCGATCA GGAGATCGTC ATCGCCGCCG ATTATCTGAT CGGCTGCGAT
GGCGGCCGCT CCACCGTGCG CAAGCTGATC GGCTCACGCC TCAGCGGCAC CGACGTGGTG
CAGCGGGTGC AGTCGACCTA CATTCACGCC CCGGCGCTCA AGGAGCTGAT CACCCAGAAG
CCGGCGTGGA TGACGATGTC GCTCAATCCG CGCCGCTGCG GCACCACGGT CGCGATCGAT
GGCCGCGACA ACTGGCTGAT CCACAACCAT CTCGCGGCGG AAGAGGTCGA GTTCGACAGC
GTCGATCGCG ATTGGGCGCT GCGCACCATT CTTGGCGTCG ACGACCGCTT CCAGTATGAG
ATCATCAGCA AGGAGGACTG GATCGGCCGC CGCCTGGTCG CCGACCGCTT CCGGGATCGC
CGCGCCTTCA TCTGCGGCGA TGCTGCACAT CTGTGGATTC CCTATGCCGG CTACGGCATG
AATGCCGGCA TCGCCGATGC GGTCGATCTG TGCTGGATGC TCGCCGGCGT CATCAGCGGC
TGGGCCAGCC CTGCCCTGCT CGACGCCTAT GAAGCGGAGC GGCAGCCGAT CACCGAGCAG
GTCTCGCATT TCGCGATGAA CCACGCGCTC GCCGTCATGA GCCAGAGACG CTCCGTGCCG
GCCGAAGTCG AGATCGATGG TCCGGTCGGC GACGCGGCGC GCAGCAAGGT CGGCCAGGCC
GCCTATGATC TCAACGTGCA GCAATATTGC TGCGCCGGCT TGAACTTCGG CTACTACTAC
GACCGGTCAC CGGCGATCTG CTACGACGGC GAAACGCCGC CGCCCTACGG CATGGGTCAT
TTCACCGCGT CGACGGCACC GGGCGCCCGC GCACCCCATG TCTGGCTGCC CGATGGGCGC
TCGCTGCTGG ACGCGCTGGG GCCGGCCTAC ACGCTGGTCC GGTTCGACCT GGCCGTCGAT
GTCGCAGGCC TGGTCGATGC GGCCGCCCGC CACGGCGTCC CGCTGGCGCT GGTCGACGTC
GATCGCGCCA GGGCCGGTTA TGGCTTTGCG GAAAGTCTGC TCCTGATACG GCCGGATTCG
CACATCGCCT GGCGCGGCAT GACCGCACCG CATGCACCCG GACGCCTGTT CAATCGCCTG
CGCGGCAATG CCAACGAACT GGGGACCACG CACCGTGACG AAGCTGCCCT TGCCTGA
 
Protein sequence
MCSPHLSGPR SKARETDMKT IQTQVLIVGA GPVGLTAAMD LASRGIDVVV AEIRRAGEPP 
NVKCNHVSAR SMEVFRRLGI VREVREGGLP ADFPNDCAYR TAVVGRELTR IPIPSRQDRY
TATGGPDTDW PTPEPPHRIN QIYLEPILFA CAQAQREIRI LNRVQLDHFD QRDDGVIARA
RDLDADQEIV IAADYLIGCD GGRSTVRKLI GSRLSGTDVV QRVQSTYIHA PALKELITQK
PAWMTMSLNP RRCGTTVAID GRDNWLIHNH LAAEEVEFDS VDRDWALRTI LGVDDRFQYE
IISKEDWIGR RLVADRFRDR RAFICGDAAH LWIPYAGYGM NAGIADAVDL CWMLAGVISG
WASPALLDAY EAERQPITEQ VSHFAMNHAL AVMSQRRSVP AEVEIDGPVG DAARSKVGQA
AYDLNVQQYC CAGLNFGYYY DRSPAICYDG ETPPPYGMGH FTASTAPGAR APHVWLPDGR
SLLDALGPAY TLVRFDLAVD VAGLVDAAAR HGVPLALVDV DRARAGYGFA ESLLLIRPDS
HIAWRGMTAP HAPGRLFNRL RGNANELGTT HRDEAALA