| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4039 |
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| Symbol | lolD |
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| ID | 5152842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4238308 |
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| End bp | 4239012 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558872 |
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| Product | lipoprotein-releasing system ABC transporter ATP-binding protein |
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| Protein accession | YP_001240011 |
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| Protein GI | 148255426 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0592839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCCC CGCTGATCGA AGCGCGCCAG GTAACGAGGA TCCTGCCCGG CGAGGTGCCG
GTGACCCTAG TCGCCGACAT CAACCTTGCG ATCGGCGCGC GCGAATTTAT CGCGATCACC
GGCCCGTCCG GGTCGGGCAA ATCCTCCCTG CTCTACCTTC TGGGTCTGCT CGATCTTCCA
ACCCGGGGCG ACGTGCTGAT CGATGGCCGC TCCACGACCG CCATGACCGA GGACGAACGC
GCGGAGATGC GGCTGTCGCG TCTCGGCTTT GTCTTCCAGT TTCATTTCCT GCTGCCGGAA
TTTTCGATCA CCGAGAATGT CGCGCTGCCG ATGCGGGCAC TGGGGCGGCT GTCGGCCCGG
GGCATCACGC AGCGCGCCGA GGAGCTGCTC GCCTCGCTCG GCCTCGCCGA CCATTTGCGC
AAGACGCCGG ACAAGCTGTC CGGCGGCCAG CGTCAGCGCG TGGCCGTGGC CCGTGCGCTC
GCCAACGATC CACCGGTGAT CCTCGCCGAC GAGCCGACCG GCAGTCTCGA CACCGCAGCG
ACGGCGCAGG TGTTCGGCAT CCTGCGTGAC CTCGTGATCA TGCGCGGCAA GACGGTCGTC
GCCGTGACCC ACGACCTCAA TCTCGCCGCG CAGATGCAGC GGCGCGTCCA TATCGTGGAC
GGCCGCCTCG CGGACGACGT GCAGGCGCAA CCGCCAGTGC GCTGA
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| Protein sequence | MSPPLIEARQ VTRILPGEVP VTLVADINLA IGAREFIAIT GPSGSGKSSL LYLLGLLDLP
TRGDVLIDGR STTAMTEDER AEMRLSRLGF VFQFHFLLPE FSITENVALP MRALGRLSAR
GITQRAEELL ASLGLADHLR KTPDKLSGGQ RQRVAVARAL ANDPPVILAD EPTGSLDTAA
TAQVFGILRD LVIMRGKTVV AVTHDLNLAA QMQRRVHIVD GRLADDVQAQ PPVR
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