| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4006 |
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| Symbol | |
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| ID | 5150448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4213254 |
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| End bp | 4214474 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640558838 |
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| Product | putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide |
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| Protein accession | YP_001239979 |
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| Protein GI | 148255394 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.883363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CCGATTCCCC GACCCGCCGC ACCCTGCTCC GTTCCGGCCT TGGTGCCGCC
GCGCTGCTCG TTCCTGCCCT GCCTGCAGCC GCCGCGCCGG CCGAATTCGA CGCCTGGCGC
GACGGCTTCC GCGGCCGCGC GCTTGCCAAG GGCATCTCGC AGGCGACCTG GACGCGCGTG
ATGGCACGGC TCGAGCCGGA CATGACCGTG TTCAAGGAGA TGCGCAATCA GCCCGAGTTC
AAGGAGCAGC TCTGGCAATA CATCAACCGC CGCGTCTCCG ACTGGCGCGT CATCAACGGC
AAGGCGGCGC TAGCGAAGAA CGAGGCGCTG TTCGCGCGCA TCGAGAAGGA TTTCGGCGTC
GAGCGCGGCA CCTTGCTGGC GCTGTGGGGC GTCGAGTCCG CGTTCGGCGA TCCGCTGGTG
CAGCAGAACC ACATGCGGCC GGTGTTTCCC GCGCTCGCCG CGCTCGCCTG GAACGAGCCG
CGCCGCAAGG CCTATTGGGA GACCGAGCTC ACCAACGCGC TGAAAATCGT CGACCGCGGC
TGGAGCACGC CGGAGGAGAT GCGCGGCTCC TGGGCCGGCG CGATGGGCCA CACACAATGG
ATGCCCGAGG TCTGGCTGAA CGTCGGCTTC GACTATGACG GCGACGGCAA GATCTCGCCG
TTCGGCCGTC CCGACGACGC GCTCGGTTCG ACCGCGCGCT ATCTCGTCAA TCGCGGCAAA
TATCATCGCG GCGAGCACTG GGGCTACGAG GTGCGGGCAC CCGGCAACAT GTCGGGCAGC
AGGACCTATG CGGCATGGCA GGCCGCCGGC GTCACCCGCG CCGACGGCCA GCCCTTCCCG
CAGCCGAACG CGACCGCGCA GCTGTGGATC CCCGTCGAGG GCGGCCCCGC CTTCCTGCTC
GGACCGAACT TCTACTCGGT GAAGTCCTAC AATCCGGCGA TGAGCTACGC GCTCGCGATT
TGCCATCTCG GCGACCGCAT CCTGGGGGCG CCGCCCTTCC TGCAGCCCTT CCCCGGCTCC
GAGCGCGCGC TGACCTTGGC CGAGGTCCAG GAGATGCAGA AGCGCCTGAC GGCGGCCGGC
TTCGACACCG GCGGCACCGA CGGCCGCGTC GGCAACGACA CCATGAAGGC GATCCGCGAC
TTCCAGGCCA AGGCCGGCCT CACACCCGCC GACGGCTATG GCGGGCTGAA GGTGCTGGCG
AAGCTGCGAC AGGGCGGTTG A
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| Protein sequence | MTQPDSPTRR TLLRSGLGAA ALLVPALPAA AAPAEFDAWR DGFRGRALAK GISQATWTRV
MARLEPDMTV FKEMRNQPEF KEQLWQYINR RVSDWRVING KAALAKNEAL FARIEKDFGV
ERGTLLALWG VESAFGDPLV QQNHMRPVFP ALAALAWNEP RRKAYWETEL TNALKIVDRG
WSTPEEMRGS WAGAMGHTQW MPEVWLNVGF DYDGDGKISP FGRPDDALGS TARYLVNRGK
YHRGEHWGYE VRAPGNMSGS RTYAAWQAAG VTRADGQPFP QPNATAQLWI PVEGGPAFLL
GPNFYSVKSY NPAMSYALAI CHLGDRILGA PPFLQPFPGS ERALTLAEVQ EMQKRLTAAG
FDTGGTDGRV GNDTMKAIRD FQAKAGLTPA DGYGGLKVLA KLRQGG
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