| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3990 |
|---|
| Symbol | |
|---|
| ID | 5152224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4197810 |
|---|
| End bp | 4198859 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640558824 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001239965 |
|---|
| Protein GI | 148255380 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTTG GAGCGACGCC GTCACCCGTC CGCGCCACGC TCGAGGACGT CGCGCGGACG
GCGGGCGTGT CGCTCGCCAC CGTCGACCGC GTCATCAACC GCCGCGAGGG CGTGCGGGCC
AAGACCGTCG CGCGTGTCGA GGCCGCCGTG GCTAAGCTCG GCTACCGCGC CGACATTGCT
GCCGCGCGTC TTGCCAGGGG CCAGAGCTTC CGCTTTGCCT TCGTGCTGCC GACCGGCGGC
AACAGTTTCA TGACGAATTT GACCGAGCAG GTCCAGCGAA CGGCGGAATG GCTGGCCGGG
CAGCGCGGCT TCATCGACAT CCTCCATGTC GACGTGTTCG ACCCGGATGT GCTGGCCGGC
ACGCTGGAGA CCTTGTCGCC GGCCTATCAG GGCGTCGCCG TGATCGCGCT CGACCATCCG
AGGGTGCGAG CCGCGATCGA CGAGCTTGCT GCCCGCGGGG TCGCGGTCGT GACGCTGGTG
TCCGACGCGC CGAGCTCGCG CCGCCTGCAT TATGTCGGCA TCGACAATCC GGCGGCGGGA
CGGACGGCGG CGACGCTGAT GGGGCGTTTC CTGGGCGGCC GTGACGGGAC TGTCGCGGTG
ATCGCGGGGT CGTTGTCGCT GCGCGATCAC GCCGAACGGC AGTTCGGCTT CAACCAGATC
CTGTGCAGCG AGTACCCGAG TCTTCGCGCG CTGCCGACGA TCGAGGGCCG CGACGACAGC
GAGCTCACGC GCCAGCTCAC GGCCGAGCTG CTGGCGCGCC ATTCGGATCT GCGCGGCATC
TATTGCTGCG GCGCCGGCAA CCGCGGCATC GCCGACGCCC TGGAGGCGTC GGGGCGGGCC
CGCGAGGTCG TCTGGATCAC CCATGAGCTG ACCCAGCATA CGCGGCGGTT CCTGGTCCGC
GGCACGCTCG ACGCGATCAT CAACCAGGAT CCGGGCCACG AGGCCCGCTC CGCGGCGCGC
GTCCTGCTCG CGCATTGTTC GGGCGAGCCG ATCAGCCCCG ATCAGGAGCG CATCCGCATC
GACATCTTTC TGCGCGACAA TCTGCCGTGA
|
|---|
| Protein sequence | MTVGATPSPV RATLEDVART AGVSLATVDR VINRREGVRA KTVARVEAAV AKLGYRADIA
AARLARGQSF RFAFVLPTGG NSFMTNLTEQ VQRTAEWLAG QRGFIDILHV DVFDPDVLAG
TLETLSPAYQ GVAVIALDHP RVRAAIDELA ARGVAVVTLV SDAPSSRRLH YVGIDNPAAG
RTAATLMGRF LGGRDGTVAV IAGSLSLRDH AERQFGFNQI LCSEYPSLRA LPTIEGRDDS
ELTRQLTAEL LARHSDLRGI YCCGAGNRGI ADALEASGRA REVVWITHEL TQHTRRFLVR
GTLDAIINQD PGHEARSAAR VLLAHCSGEP ISPDQERIRI DIFLRDNLP
|
|---|
| |