Gene BBta_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3979 
Symbol 
ID5151687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4185583 
End bp4186371 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640558813 
Productputative outer-membrane immunogenic protein precursor 
Protein accessionYP_001239954 
Protein GI148255369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TTTTGCTCGC TGTGACCGCT ATGGCGGCAA TGACCGGTAC CGCATCCGCC 
GCCGATTTGG CCGCCCGTCC CTATACCAAA GCTCCGATCG CTGCACCGCT CGCGCCGAGC
TGGACCGGCT TCTACATTTT CGGCGGCGGC GGTGGCGGCC TCTGGAATGC GGACACGACG
ATCAACAGCA CGGCCACTGG TGCGGCGCTG ATCGGTCTCA ACCAGAAGCA GGGCGGCGAA
GGCTGGTTCG GCACGGTGGG TGCCGGTTAC GACTGGCAAG TCAACCCGAC CTGGGTGATT
GGTGCATTCG CTGATGGCCA GTTTGGCAGC ATCAAGGGCA CTATCCAGGA CCAGGGGGCG
TTGATCGCTG GCAACATCAA GAACGACTAC TCGTGGGCCG TCGGCGGACG CGTCGGTTAT
CTTGTCGCCC CGAACGTTCT CTCTTACGTC AATGCCGGCT ACTCCAGCTC GCACTGGAAG
GGCACGACGC TGTTGAGCAC CGTCACGGGC GGTGCGTCGG GCCTTCACAC CGATGGTTTC
GATCGCAGCG GCTGGTTCAT TGGCGGCGGC GTCGAGAACA ACCTGAACAT CTTCGGCATC
TCGGCGCCGG GCTGGTTCAT GAAGACCGAA TATCGCTCGG CCTTCTACGA CCGCAAGAAC
ATCTCCGAGC GTGTCGACAC AACGAACGCC CTTTTCGGTC GCGACATCAC CTTCAAGCCG
TGGGTGCAGA CCATCAGCAC CTCGCTGGTC TACCGCTTCA ACTGGACCGG CCCGGCCGTC
AAATACTGA
 
Protein sequence
MKKLLLAVTA MAAMTGTASA ADLAARPYTK APIAAPLAPS WTGFYIFGGG GGGLWNADTT 
INSTATGAAL IGLNQKQGGE GWFGTVGAGY DWQVNPTWVI GAFADGQFGS IKGTIQDQGA
LIAGNIKNDY SWAVGGRVGY LVAPNVLSYV NAGYSSSHWK GTTLLSTVTG GASGLHTDGF
DRSGWFIGGG VENNLNIFGI SAPGWFMKTE YRSAFYDRKN ISERVDTTNA LFGRDITFKP
WVQTISTSLV YRFNWTGPAV KY