Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3979 |
Symbol | |
ID | 5151687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4185583 |
End bp | 4186371 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640558813 |
Product | putative outer-membrane immunogenic protein precursor |
Protein accession | YP_001239954 |
Protein GI | 148255369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC TTTTGCTCGC TGTGACCGCT ATGGCGGCAA TGACCGGTAC CGCATCCGCC GCCGATTTGG CCGCCCGTCC CTATACCAAA GCTCCGATCG CTGCACCGCT CGCGCCGAGC TGGACCGGCT TCTACATTTT CGGCGGCGGC GGTGGCGGCC TCTGGAATGC GGACACGACG ATCAACAGCA CGGCCACTGG TGCGGCGCTG ATCGGTCTCA ACCAGAAGCA GGGCGGCGAA GGCTGGTTCG GCACGGTGGG TGCCGGTTAC GACTGGCAAG TCAACCCGAC CTGGGTGATT GGTGCATTCG CTGATGGCCA GTTTGGCAGC ATCAAGGGCA CTATCCAGGA CCAGGGGGCG TTGATCGCTG GCAACATCAA GAACGACTAC TCGTGGGCCG TCGGCGGACG CGTCGGTTAT CTTGTCGCCC CGAACGTTCT CTCTTACGTC AATGCCGGCT ACTCCAGCTC GCACTGGAAG GGCACGACGC TGTTGAGCAC CGTCACGGGC GGTGCGTCGG GCCTTCACAC CGATGGTTTC GATCGCAGCG GCTGGTTCAT TGGCGGCGGC GTCGAGAACA ACCTGAACAT CTTCGGCATC TCGGCGCCGG GCTGGTTCAT GAAGACCGAA TATCGCTCGG CCTTCTACGA CCGCAAGAAC ATCTCCGAGC GTGTCGACAC AACGAACGCC CTTTTCGGTC GCGACATCAC CTTCAAGCCG TGGGTGCAGA CCATCAGCAC CTCGCTGGTC TACCGCTTCA ACTGGACCGG CCCGGCCGTC AAATACTGA
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Protein sequence | MKKLLLAVTA MAAMTGTASA ADLAARPYTK APIAAPLAPS WTGFYIFGGG GGGLWNADTT INSTATGAAL IGLNQKQGGE GWFGTVGAGY DWQVNPTWVI GAFADGQFGS IKGTIQDQGA LIAGNIKNDY SWAVGGRVGY LVAPNVLSYV NAGYSSSHWK GTTLLSTVTG GASGLHTDGF DRSGWFIGGG VENNLNIFGI SAPGWFMKTE YRSAFYDRKN ISERVDTTNA LFGRDITFKP WVQTISTSLV YRFNWTGPAV KY
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