Gene BBta_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3959 
Symbol 
ID5151813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4165080 
End bp4166348 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content68% 
IMG OID640558794 
Producthypothetical protein 
Protein accessionYP_001239935 
Protein GI148255350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA GCGCGCCGCA AGAGCCTGCG CAAGCCGAGG AAACCCCGCC TGCTCCGCCG 
CCTGCGAAGG CGGCACGGAC GGCCTTGGTC GTGCTCGGCC TGTGCTTTGC GCTGTCCGTG
CTCGGCCGGG GGCTCGGCGA AAGCTTCACC GTCTTTCTCA AGCCGATTTC CGACAGCTTC
GGCTGGGACC GTGCCGAGGT GGTGTCGATC TATTCGCTGA CGGCGCTGGC CGGCGGTCTC
GCCGCCCCGC TGATCGGCCG GCTGTTCGAC CATTCGGGGC CACGCGCGGT CTATGCGCTC
GGGCTGCTGC TGCTCGGAAC GGCGTTCACG GCGGCCGCGC ATGCCCAGGC GCTGTGGCAG
TTCCAGCTCA GCATCGGCCT GTGCGTCGGC AGCGGCATCG CGCTGATCGG CAACGTCCCG
AACTCCATCC TGCTCGGACG CTGGTTCGGC AAGAAGCTGC CGACCGCCAT GGCGGTGATC
TACTCGGCCA CCGGCGCCGG CGTGCTGCTG CTGCTGCCGG GCTCGCAGCT CTTGATCGAT
GCCATCGGCT GGCGCAGCGC CTATCAGTTG TTTGGCATCA CGGCATTCGT CCTGCTGCTG
CCGCTGGCCC TTCTGCCCTG GCGGCTGTTT GCGGCCGGCG CCCCCCACGT CACCAAACCG
ATCGCCGCAG ACTTCACCGA CGATGCCTGG ACCTTGTCGC GCGCGCTGCG CCATCACGCC
TTCTGGGCGC TGTTTGCGAC CTTCTTCTTC ACCGCGATCG GCATGTATGC GATCGCCCCG
CAGGTCGTCG CCTATCTGAT CGATGCCGGA TTCGCGCCGC TGCAGGCGGC CACCGCCTGG
GGCTTCTCCG GCGTCGTGCT GCTGTTCGGC ATGCTCGGCG TCTCCGCGCT CGACGGGCTG
ATCGGCCGGC GTCCGTCAGT GCTGTTCTCT TATGCGGTCT CGATCGCCGG CATCCTGATG
CTGTGGGCGC TGCAGGTCTG GCCCAACATC CTTCTGCTCA CCGGCTTCGT CGTCTGCTTC
GGCAGCATGA TCGGCTCGCG CGGACCGCTG TTGTCGGCGA CGGCGATGAA GATCTTCCGC
GGCAAGCGGC TCGGCACGAT CTACGGCACC ATCACGATCG GCAGCGGGCT CGGCTCGGCG
TTGGGATCAT GGAGCGGCGG CGTCATCCAC GATCTCACGC ATGGCTACGA CGCGGTCATC
CTGCTGGCGC TCGTCAGCGT CATCATCGGC ATGATCCCGT TCCTGGTCGT GCCGGCGCTG
CGGAGCTGA
 
Protein sequence
MTISAPQEPA QAEETPPAPP PAKAARTALV VLGLCFALSV LGRGLGESFT VFLKPISDSF 
GWDRAEVVSI YSLTALAGGL AAPLIGRLFD HSGPRAVYAL GLLLLGTAFT AAAHAQALWQ
FQLSIGLCVG SGIALIGNVP NSILLGRWFG KKLPTAMAVI YSATGAGVLL LLPGSQLLID
AIGWRSAYQL FGITAFVLLL PLALLPWRLF AAGAPHVTKP IAADFTDDAW TLSRALRHHA
FWALFATFFF TAIGMYAIAP QVVAYLIDAG FAPLQAATAW GFSGVVLLFG MLGVSALDGL
IGRRPSVLFS YAVSIAGILM LWALQVWPNI LLLTGFVVCF GSMIGSRGPL LSATAMKIFR
GKRLGTIYGT ITIGSGLGSA LGSWSGGVIH DLTHGYDAVI LLALVSVIIG MIPFLVVPAL
RS