Gene BBta_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3942 
Symbol 
ID5149409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4137036 
End bp4137539 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID640558776 
Productputative NUDIX-like hydrolase 
Protein accessionYP_001239918 
Protein GI148255333 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.180458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.438057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCT CCGATCACCT GAGAGCCGTC CGCAGCAAGG TCGGCCACGA TCTGCTTGCG 
ACCACGGCCG TCTCGATCTC GCTGTTCGAT GACCAGGGTC GGATCCTGCT CGGCCGCGAC
GCGGAGACGG GCCATTGGAC CCTGCCCGGC GGCGCCATCG ATCCGAACGA GCATCCCGCC
GACGCCGCGA CGCGCGAATG CTTCGAGGAG ACTGGTCTGC TCGTCCGTCC CCAGCGCCTG
CTCGGCGTGT TTGGCGGCCC CGAATTCCTC ATCCGCTATC CCAACGGAGA TCTGACTTAT
TACACGGTGA TCGCGTTCGA GGCAGCCGTC ATCGGCGGTG CGCTCGCAGC CGATGGCGAC
GAGATCGCCG CGCTGCGCTT CGTCGACAGA ACGGAGTGGG AAGCGCTCGA TATCTCCCCC
TCGAGCCGCA TCATCTCGCG CCGGGCGTTC GAGCGCGATG CCGTCCCCTA TTTCGCGCCG
GCCTGCTGGC GGCCCGAGAG CTGA
 
Protein sequence
MPISDHLRAV RSKVGHDLLA TTAVSISLFD DQGRILLGRD AETGHWTLPG GAIDPNEHPA 
DAATRECFEE TGLLVRPQRL LGVFGGPEFL IRYPNGDLTY YTVIAFEAAV IGGALAADGD
EIAALRFVDR TEWEALDISP SSRIISRRAF ERDAVPYFAP ACWRPES