Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3942 |
Symbol | |
ID | 5149409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4137036 |
End bp | 4137539 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640558776 |
Product | putative NUDIX-like hydrolase |
Protein accession | YP_001239918 |
Protein GI | 148255333 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.438057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCT CCGATCACCT GAGAGCCGTC CGCAGCAAGG TCGGCCACGA TCTGCTTGCG ACCACGGCCG TCTCGATCTC GCTGTTCGAT GACCAGGGTC GGATCCTGCT CGGCCGCGAC GCGGAGACGG GCCATTGGAC CCTGCCCGGC GGCGCCATCG ATCCGAACGA GCATCCCGCC GACGCCGCGA CGCGCGAATG CTTCGAGGAG ACTGGTCTGC TCGTCCGTCC CCAGCGCCTG CTCGGCGTGT TTGGCGGCCC CGAATTCCTC ATCCGCTATC CCAACGGAGA TCTGACTTAT TACACGGTGA TCGCGTTCGA GGCAGCCGTC ATCGGCGGTG CGCTCGCAGC CGATGGCGAC GAGATCGCCG CGCTGCGCTT CGTCGACAGA ACGGAGTGGG AAGCGCTCGA TATCTCCCCC TCGAGCCGCA TCATCTCGCG CCGGGCGTTC GAGCGCGATG CCGTCCCCTA TTTCGCGCCG GCCTGCTGGC GGCCCGAGAG CTGA
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Protein sequence | MPISDHLRAV RSKVGHDLLA TTAVSISLFD DQGRILLGRD AETGHWTLPG GAIDPNEHPA DAATRECFEE TGLLVRPQRL LGVFGGPEFL IRYPNGDLTY YTVIAFEAAV IGGALAADGD EIAALRFVDR TEWEALDISP SSRIISRRAF ERDAVPYFAP ACWRPES
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