| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3924 |
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| Symbol | |
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| ID | 5149905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4112440 |
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| End bp | 4113591 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640558757 |
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| Product | putative amino acid transport protein, permease protein |
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| Protein accession | YP_001239900 |
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| Protein GI | 148255315 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.96716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.532793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGAG GAAAGGCAGG ATGGAACGGC GTCATCCTGC AGATTCTGTT CGTCGCAGTC
CTGGTGTGGG TTGGCTACGA GATCGTAGCC AACGCCCGCA GCAATCTCGC GGCCCAACGC
ATCACGTCGG GCTTCGGATT TCTCAACAAC ACGGCCGGGT TCGACGTGAA CCAGGCCTTG
ATCAGCTACT CTGGCTCTGA CAGCTATAGC CGCGTGCTGC TGGTCGGCAT CCTCAATACG
TTGCTGGTCT CCGTGATCGG CATCGTCCTG TCGACCATCC TCGGCTTCCT GGTCGCGCTC
GGCCGGTTGT CGCCGAATGT GCTGCTGTCG CGGGTTTCTG GCGCCTATGT CGAGCTGATC
CGGAACCTGC CTTTGCTGTT CCAGATCCTG TTCTGGTATC TCGCGGTGCT GTCGGCGCTG
CCGGGGCCGC GTCAGAGCAT CTCGCTGTTT TCGACCTTCT TTCTGAACAA TCGCGGTTTC
ATTGTTCCGC GCCCGATCGA GGAGCCCGGC CTGACGCCGT TCCTGATCGC GCTCGGGGCC
GCGATCGTCG TCTCCCTCGG TCTGCGTTAT TATGCGCGGC GTGAGTTGTT CGTGCGCGGC
CATGCGATGC GCATCTGGCC TTACGTGCTC GGCTTGCTGG TCGGCCTGCC GCTGATGGCG
ATGCTGATGT TCGGAGTGCC CGTTGCCTTC GAGGTTCCGG TGCTGAAAGG CTTCAACTTC
GCCGGTGGCT CGCGCATCAT CCCCGAGCTC GTTGCGCTGA CCGTGGCGCT GACGATGTAC
ACGGCCTCGT TCATCGCCGA GGTGGTGCGC GGCGGCATCC TCTCGGTGCA CAAGGGGCAG
ATGGAAGCGG GCCTGTCGCT GGGCCTTAGC CGCGGCACGG TGCTGCGCCT GATCGTGGTG
CCGCAGGCGC TGCGGGTGAT CCTGCCGCCA TTGACCAACC AATATCTCAA CTTGACGAAG
AACTCGTCGC TCGCCGTCGC GATCGGCTAC CCCGATCTCG TCTCGGTGTT TGCCGGCACG
ACGATGAGCC AGACCGGCCA GGCCATCGAG ATCATCGCGA TCACGATGGG CGTCTATCTG
GCGATTTCGC TGATCACCAG CGCGATGATG AGCTTCTACA GCTGGCGACT TGGCAAGAGA
CTTGGTGCAT GA
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| Protein sequence | MLGGKAGWNG VILQILFVAV LVWVGYEIVA NARSNLAAQR ITSGFGFLNN TAGFDVNQAL
ISYSGSDSYS RVLLVGILNT LLVSVIGIVL STILGFLVAL GRLSPNVLLS RVSGAYVELI
RNLPLLFQIL FWYLAVLSAL PGPRQSISLF STFFLNNRGF IVPRPIEEPG LTPFLIALGA
AIVVSLGLRY YARRELFVRG HAMRIWPYVL GLLVGLPLMA MLMFGVPVAF EVPVLKGFNF
AGGSRIIPEL VALTVALTMY TASFIAEVVR GGILSVHKGQ MEAGLSLGLS RGTVLRLIVV
PQALRVILPP LTNQYLNLTK NSSLAVAIGY PDLVSVFAGT TMSQTGQAIE IIAITMGVYL
AISLITSAMM SFYSWRLGKR LGA
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