Gene BBta_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3873 
Symbol 
ID5148833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4057764 
End bp4058324 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID640558710 
Producthypothetical protein 
Protein accessionYP_001239854 
Protein GI148255269 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.226268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.215319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCACA GCAAGATCAG CTACTACGCC GAGCTTTTCC TCTACCCGAT CGTCGTCGCC 
GCGCTTCTGC TGTTCGATCT CGCGAGCAAC GGGGTCGCCC TGCAGCCGCG CTGGCTGCTG
GCCGCAGCCG GCGGGGCGCT GCTGTGGACG CTCGCCGAAT ATCTGGTGCA CCGGTTCCTG
TATCATGAGG TTGCCATCCT CAAGCAACTC CACGGACTGC ACCACGCGCG CCCCAGCGAT
CTCATCGGCG CGCCGATCTG GGTGAGTGTC GTCATCTTCT TATCATTCTT CGTGCTCGTC
GCGAGCCTCG CCGACCTGCA GACCGCAAGC GGAACGACGA GCGGTCTGCT GACTGGTTAC
GTCTTGTATC TGTTGGTCCA CGATGCCGTG CATCACTGGC CATTGGCCGA ACAGTCGCTG
CTGCAGTCCT GGCTGCGCAG CTGCCGACTC CGCCATGTCC GACACCATCG CGGCCCGCCC
GGCAATTTCG GCGTCGTCAC GGGTGTCTGG GACCATGTCT TTGGCACGGC GCTCGCGCCG
GGACAAACGA GGAACGCCTG A
 
Protein sequence
MNHSKISYYA ELFLYPIVVA ALLLFDLASN GVALQPRWLL AAAGGALLWT LAEYLVHRFL 
YHEVAILKQL HGLHHARPSD LIGAPIWVSV VIFLSFFVLV ASLADLQTAS GTTSGLLTGY
VLYLLVHDAV HHWPLAEQSL LQSWLRSCRL RHVRHHRGPP GNFGVVTGVW DHVFGTALAP
GQTRNA