Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3873 |
Symbol | |
ID | 5148833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4057764 |
End bp | 4058324 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558710 |
Product | hypothetical protein |
Protein accession | YP_001239854 |
Protein GI | 148255269 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.226268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.215319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCACA GCAAGATCAG CTACTACGCC GAGCTTTTCC TCTACCCGAT CGTCGTCGCC GCGCTTCTGC TGTTCGATCT CGCGAGCAAC GGGGTCGCCC TGCAGCCGCG CTGGCTGCTG GCCGCAGCCG GCGGGGCGCT GCTGTGGACG CTCGCCGAAT ATCTGGTGCA CCGGTTCCTG TATCATGAGG TTGCCATCCT CAAGCAACTC CACGGACTGC ACCACGCGCG CCCCAGCGAT CTCATCGGCG CGCCGATCTG GGTGAGTGTC GTCATCTTCT TATCATTCTT CGTGCTCGTC GCGAGCCTCG CCGACCTGCA GACCGCAAGC GGAACGACGA GCGGTCTGCT GACTGGTTAC GTCTTGTATC TGTTGGTCCA CGATGCCGTG CATCACTGGC CATTGGCCGA ACAGTCGCTG CTGCAGTCCT GGCTGCGCAG CTGCCGACTC CGCCATGTCC GACACCATCG CGGCCCGCCC GGCAATTTCG GCGTCGTCAC GGGTGTCTGG GACCATGTCT TTGGCACGGC GCTCGCGCCG GGACAAACGA GGAACGCCTG A
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Protein sequence | MNHSKISYYA ELFLYPIVVA ALLLFDLASN GVALQPRWLL AAAGGALLWT LAEYLVHRFL YHEVAILKQL HGLHHARPSD LIGAPIWVSV VIFLSFFVLV ASLADLQTAS GTTSGLLTGY VLYLLVHDAV HHWPLAEQSL LQSWLRSCRL RHVRHHRGPP GNFGVVTGVW DHVFGTALAP GQTRNA
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