Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3871 |
Symbol | |
ID | 5148831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4056319 |
End bp | 4056906 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558708 |
Product | putative cytochrome b561 |
Protein accession | YP_001239852 |
Protein GI | 148255267 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.614366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.414753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATGGA CGAACACGAA GCGGGAATTT GGCGCCCTGG CCAAGTTCTT CCACTGGAGC AGCGCGGCCG CCTTCATCGT CGCCTATGCC GTCGTGTACT ACGTGATCTG GTTCATGGAC GACATGGCGC CTGAGGCGCT GCCGGTGCTC AACATTCACT GGGTGCTGGG GATCATCGTG GGTTTCCTGG TTCTGCCTCG GCTGCTCTGG CGCTTCGCCA ATGTGCAGCC TGACCCGCCG CATGGCTCCA GGGTCGAGCA CGTGCTTGCC CACGTCGCAC ATGGGGGACT GTACGCCCTG CTCATCGTCA TGCCGCTGAC CGGCTATATC GGGACCGACG CTGCGACTGA TTTCGGATTG TTCAAGGTGC CGAGTTTCCG TGAGACGGCC GTGTTCGGTT GGATCGAGAG CGGCCTTGGA ATCGACTGGG ACAGGTTCGA GCCGCCGGTC GATGCGATCC ACCATTTCGT CGGCAAATGG ATCGCGTGGA CGGTCGTCGC CCTGCACGTC GCCGCCGCGC TGTTTCATCA CCTGGTGCGG CGGGACAACG TCCTGACCCG GATGTTGCCC GGCCGTTCGG CTGCATGA
|
Protein sequence | MPWTNTKREF GALAKFFHWS SAAAFIVAYA VVYYVIWFMD DMAPEALPVL NIHWVLGIIV GFLVLPRLLW RFANVQPDPP HGSRVEHVLA HVAHGGLYAL LIVMPLTGYI GTDAATDFGL FKVPSFRETA VFGWIESGLG IDWDRFEPPV DAIHHFVGKW IAWTVVALHV AAALFHHLVR RDNVLTRMLP GRSAA
|
| |