Gene BBta_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3871 
Symbol 
ID5148831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4056319 
End bp4056906 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content63% 
IMG OID640558708 
Productputative cytochrome b561 
Protein accessionYP_001239852 
Protein GI148255267 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.614366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.414753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATGGA CGAACACGAA GCGGGAATTT GGCGCCCTGG CCAAGTTCTT CCACTGGAGC 
AGCGCGGCCG CCTTCATCGT CGCCTATGCC GTCGTGTACT ACGTGATCTG GTTCATGGAC
GACATGGCGC CTGAGGCGCT GCCGGTGCTC AACATTCACT GGGTGCTGGG GATCATCGTG
GGTTTCCTGG TTCTGCCTCG GCTGCTCTGG CGCTTCGCCA ATGTGCAGCC TGACCCGCCG
CATGGCTCCA GGGTCGAGCA CGTGCTTGCC CACGTCGCAC ATGGGGGACT GTACGCCCTG
CTCATCGTCA TGCCGCTGAC CGGCTATATC GGGACCGACG CTGCGACTGA TTTCGGATTG
TTCAAGGTGC CGAGTTTCCG TGAGACGGCC GTGTTCGGTT GGATCGAGAG CGGCCTTGGA
ATCGACTGGG ACAGGTTCGA GCCGCCGGTC GATGCGATCC ACCATTTCGT CGGCAAATGG
ATCGCGTGGA CGGTCGTCGC CCTGCACGTC GCCGCCGCGC TGTTTCATCA CCTGGTGCGG
CGGGACAACG TCCTGACCCG GATGTTGCCC GGCCGTTCGG CTGCATGA
 
Protein sequence
MPWTNTKREF GALAKFFHWS SAAAFIVAYA VVYYVIWFMD DMAPEALPVL NIHWVLGIIV 
GFLVLPRLLW RFANVQPDPP HGSRVEHVLA HVAHGGLYAL LIVMPLTGYI GTDAATDFGL
FKVPSFRETA VFGWIESGLG IDWDRFEPPV DAIHHFVGKW IAWTVVALHV AAALFHHLVR
RDNVLTRMLP GRSAA