| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3858 |
|---|
| Symbol | |
|---|
| ID | 5150161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4043659 |
|---|
| End bp | 4044240 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640558696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239840 |
|---|
| Protein GI | 148255255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.191363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.585627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCGT ACCGAGACCC GCTCGGTGAG TCCGCAACGG ACCCGCCGGT TCTGGTGTGT
GCCGATCTGC AGTGCGAGTA TCTCGCCGAA GGGCGCAAGC ATCTGATTGC CGACGGCGAC
CTGATCATGT CGCGCTGTCG GCAGTTGATT GCGTTGTGGC GCGGCAATCT ATGGCCGGTG
CTTCACCTCA AGCGGATTGC GCAGGCCGCC TGGTTCAATC CGGCTTCCAA TCTGACGAAT
TGGCTTCCTG AGGTCAGGCC GACGCCTGGC GAACTGACGT TCGAGCATCC GCTGCCATCG
GCCTACAGCT CGGCGCGGTT TGCCGAGTAC ATGTCGAACA TGCGCGGCAT CCGCTGCGTG
CTGCTTGGCT TCTCGCTGGA CGAGACGATC CTCTCGACAG TTGTGGAAGG CTTCCATCGC
AGCCACCGTT ATCAGGTGAT CGAGGACGCC GTGGCCTGCC GCCTGGCATG TGACGGCGAT
GTCGCCGCCT ACAAGCTGGT TGTCACCCGG GTGATCAGCA ACTTCGCCGG CGTGCTCGAC
AGCGCCGACC TGACAAGATC CTGCGGCCGT CTCGCGGTGT GA
|
|---|
| Protein sequence | MMSYRDPLGE SATDPPVLVC ADLQCEYLAE GRKHLIADGD LIMSRCRQLI ALWRGNLWPV
LHLKRIAQAA WFNPASNLTN WLPEVRPTPG ELTFEHPLPS AYSSARFAEY MSNMRGIRCV
LLGFSLDETI LSTVVEGFHR SHRYQVIEDA VACRLACDGD VAAYKLVVTR VISNFAGVLD
SADLTRSCGR LAV
|
|---|
| |