Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3781 |
Symbol | |
ID | 5150815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3960626 |
End bp | 3961270 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558620 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001239764 |
Protein GI | 148255179 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAGG TCGATCCGGT CAAGCATGAG CAGAAGCGGC AGGAGATACT CCAGGCCGCC CTGTCCTGCT TCGTCAGGGA CGGATTTCAC GGCGCCAGCA CCACTGACAT CTGCGCCGCG GCCAAGATCA GCCCCGGTCA CCTCTATCAC TACTTCGGCA GCAAGGAGGC CATCATCGAG GCCCTCGTTC AGCACAGCCT CGCGCATGCG GCATCGCGAT TCGAAGCGAT CCTGGCCTCC CCCGACGTCA TCGAGGCGTT CCTGATGGAG CTCGAGACGA CGAGCATCCG CCGTCGCGAA GCCCAGGTTC TCAGCGCCGA GGCGCTGGCC GAGGCCTGCC GCAATCCGAG CTTCGCCCGC ATCGTCCAGG ACCAGGGCCG CGGCATCCGG CGGCTGCTGG TGGATTTCCT TGCGAAGGCC CAGCAGCGCG GCGACGTCGA TCCCGGCCTC GATCCCGAAG CAACCGCGAA CATCCTGGTT GCGATCGTCG ACGGCGCGCG CGCACTGCCG ATCCGCAATC CCGCGGCTGA CATCAAGCAG AGCACGGACC ATCTTCGTAT CATGATCACG CGCTTCCTCA GGCCGCCCGC AAGGCGGGAG CCTGCTCCTG CAGACGCGCA GCGCCCGGAG GGCGGCGGCA ATTGA
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Protein sequence | MRKVDPVKHE QKRQEILQAA LSCFVRDGFH GASTTDICAA AKISPGHLYH YFGSKEAIIE ALVQHSLAHA ASRFEAILAS PDVIEAFLME LETTSIRRRE AQVLSAEALA EACRNPSFAR IVQDQGRGIR RLLVDFLAKA QQRGDVDPGL DPEATANILV AIVDGARALP IRNPAADIKQ STDHLRIMIT RFLRPPARRE PAPADAQRPE GGGN
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