Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3757 |
Symbol | |
ID | 5152436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3934700 |
End bp | 3935929 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558597 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_001239741 |
Protein GI | 148255156 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAATGA AAAACAGATT CATCGCGTCA TTGCTGCTGG GAACGGCGCT CAGCTTCGCG GCGGGCAGCA TCGCCTCGGC CGGCGACAAG ACCGTCAAGA TCGGCGCGCT GTCCGACCAG TCCGGCCTGT ATTCGGATCT CGGCGGCCCC GGCTCGACCT TGGCGACGCA GATGGCCATC GAGGATTCCG GGCTCGCGGG CAAGGGCTGG AAGATCGATG TGATCTCCGG CGACCATCAG AACAAGCCGG ATATCGGCAC CTCGATCGCG CGGCAATGGT TCGACGTCGA CAAGGTCGAC ATCATCGTCG ACGTGCCGAA TTCGGGCGTG GCGCTGGCGG TCAACAACGT CGTCAAGGAG AAGAACGGCG TCTACATCAA TTCGGGGGCC GCGACCTCCG ACCTCACCAA TGCGCAGTGC TCGCCCAACA CGGTGCACTG GACCTATGAC ACCTACATGC TGGCGCACAC CACCGGCCAG GCGCTGGTCA AGGCGGGCGG CACCAGTTGG TTCTTCCTGA CCGCCGACTA TGCATTCGGC GCGGCGCTGG AGCGCGACAC CACGGCGGTC GTGACCGCCA ATGGCGGCAA GGTGATCGGC GGCGTCAAGC ACCCGCTCAA CACCTCCGAC TTCTCGTCCT TCCTGCTGCA GGCGCAGTCC TCGGGCGCCA AGGTCATCGG CCTCGCCAAT GCCGGCGGCG ACACCACCAA CTCGATCAAG CAGGCGGCCG AGTTCGGCAT CACCAAGGGC GGCCAGAAGC TTGCCGCGCT GCTGCTGTTC CTGACCGACG TCAAGTCGAT CGGGCTCGAC ATCGCGCAGG GCCTCAATTT CACCGAAACC TTCTACTGGG ACATGAACGA CCAGACCCGC GCCTTCTCGG AGCGCTTTGC CAAGCGGATG AAGAACGGTG CGCCGCCGAC CATGGTGCAG GCCGGCGTCT ATGCGGGCCT CCTGCATTAC TTCAAGGCGC TGGAGGCGCT CGGCGAGAAC CCCCATGACG GCGTCAAGAT CGTCGAGAAG ATGAAGTCGA TCCCGACCGA GGATGCGCTG TTCGGCAAGG GCGAGATCCA GCCCAATGGC CGCACCATCC ACACCGCCTA TTTGTTCGAG GTCAAGAAAC CGTCCGAGTC CAAGGCGCCG TGGGATCTCT ACAAGCTGGT CGGCTCGGTG CCGGGCGACC AGGCCTTCAC GCCGCTCGAC AAGAGTGCGT GCGCCCTGTT GAAGAAGTGA
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Protein sequence | MEMKNRFIAS LLLGTALSFA AGSIASAGDK TVKIGALSDQ SGLYSDLGGP GSTLATQMAI EDSGLAGKGW KIDVISGDHQ NKPDIGTSIA RQWFDVDKVD IIVDVPNSGV ALAVNNVVKE KNGVYINSGA ATSDLTNAQC SPNTVHWTYD TYMLAHTTGQ ALVKAGGTSW FFLTADYAFG AALERDTTAV VTANGGKVIG GVKHPLNTSD FSSFLLQAQS SGAKVIGLAN AGGDTTNSIK QAAEFGITKG GQKLAALLLF LTDVKSIGLD IAQGLNFTET FYWDMNDQTR AFSERFAKRM KNGAPPTMVQ AGVYAGLLHY FKALEALGEN PHDGVKIVEK MKSIPTEDAL FGKGEIQPNG RTIHTAYLFE VKKPSESKAP WDLYKLVGSV PGDQAFTPLD KSACALLKK
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